|
|
|
题名
|
作者
|
年代
|
出处
|
被引量
|
| 1 | High-density SNP-based genetic maps for the parents of an outcrossed and a selfed tetraploid garden rose cross, inferred from admixed progeny using the 68k rose SNP array显示文摘Dense genetic maps create a base for QTL analysis of important traits and future implementation of marker-assisted breeding.In tetraploid rose,the existing linkage maps include<300 markers to cover 28 linkage groups(4 homologous sets of 7 chromosomes).Here we used the 68k WagRhSNP Axiom single-nucleotide polymorphism(SNP)array for rose,in combination with SNP dosage calling at the tetraploid level,to genotype offspring from the garden rose cultivar‘Red New Dawn’.The offspring proved to be not from a single bi-parental cross.In rose breeding,crosses with unintended parents occur regularly.We developed a strategy to separate progeny into putative populations,even while one of the parents was unknown,using principle component analysis on pairwise genetic distances based on sets of selected SNP markers that were homozygous,and therefore uninformative for one parent.One of the inferred populations was consistent with self-fertilization of‘Red New Dawn’.Subsequently,linkage maps were generated for a bi-parental and a self-pollinated population with‘Red New Dawn’as the common maternal parent.The densest map,for the selfed parent,had 1929 SNP markers on 25 linkage groups,covering 1765.5 cM at an average marker distance of 0.9 cM.Synteny with the strawberry(Fragaria vesca)genome was extensive.Rose ICM1 corresponded to F.vesca pseudochromosome 7(Fv7),ICM4 to Fv4,ICM5 to Fv3,ICM6 to Fv2 and ICM7 to Fv5.Rose ICM2 corresponded to parts of F.vesca pseudochromosomes 1 and 6,whereas ICM3 is syntenic to the remainder of Fv6. | Mirjana Vukosavljev Paul Arens Roeland E Voorrips Wendy P C van't Westende G D Esselink Peter M Bourke Peter Cox W Eric van de Weg Richard G F Visser Chris Maliepaard Marinus J M Smulders | 2016 | Horticulture Research2016，3，1： | 6 |
| 2 | Phased,chromosome-scale genome assemblies of tetraploid potato reveal a complex genome,transcriptome,and predicted proteome landscape underpinning genetic diversity显示文摘Cultivated potato is a clonally propagated autotetraploid species with a highly heterogeneous genome.Phased assemblies of six cultivars including two chromosome-scale phased genome assemblies revealed extensive allelic diversity,including altered coding and transcript sequences,preferential allele expression,and structural variation that collectively result in a highly complex transcriptome and predicted proteome,which are distributed across the homologous chromosomes.Wild species contribute to the extensive allelic diversity in tetraploid cultivars,demonstrating ancestral introgressions predating modern breeding efforts.As a clonally propagated autotetraploid that undergoes limited meiosis,dysfunctional and deleterious alleles are not purged in tetraploid potato.Nearly a quarter of the loci bore mutations are predicted to have a high negative impact on protein function,complicating breeder’s efforts to reduce genetic load.The StCDF1 locus controls maturity,and analysis of six tetraploid genomes revealed that 12 allelic variants of StCDF1 are correlated with maturity in a dosage-dependent manner.Knowledge of the complexity of the tetraploid potato genome with its rampant structural variation and embedded deleterious and dysfunctional alleles will be key not only to implementing precision breeding of tetraploid cultivars but also to the construction of homozygous,diploid potato germplasm containing favorable alleles to capitalize on heterosis in F1 hybrids. | Genevieve Hoopes Xiaoxi Meng John P.Hamilton Sai Reddy Achakkagari Fernanda de Alves Freitas Guesdes Marie E.Bolger Joseph J.Coombs Danny Esselink Natalie R.Kaiser Linda Kodde Maria Kyriakidou Brian Lavrijssen Natascha van Lieshout Rachel Shereda Heather K.Tuttle Brieanne Vaillancourt Joshua C.Wood Jan Mde Boer Nolan Bornowski Peter Bourke David Douches Herman Jvan Eck Dave Ellis Max J.Feldman Kyle M.Gardner Johannes C.P.Hopman Jiming Jiang Walter S.De Jong Joseph C.Kuhl Richard G.Novy Stan Oome Vidyasagar Sathuvalli Ek Han Tan Remco A.Ursum M.Isabel Vales Kelly Vining Richard G.F.Visser Jack Vossen G.Craig Yencho Noelle L.Anglin Christian W.B.Bachem Jeffrey B.Endelman Laura M.Shannon Martina V.Stromvik Helen H.Tai Bjorn Usadel C.Robin Buell Richard Finkers | 2022 | Molecular Plant2022，15，3： | 4 |
| 3 | Long-time storage effect in frozen dough by spectroscopy and microscopy显示文摘 | Esselink E F Van Aalst H Maliepaard M | 2003 | Cereal Chemistry2003，80，4： | 1 |
| 4 | Differential effects of interleukin - 3 and interleukin - 1 on the proliferation and interleukin- 6 protein secretion of acute myeloid leukemic cells:the involvement of ERK,p38 and STAT5显示文摘 | Birkenkamp KU Esselink MT Kruijer W | 1999 | Eur Cytokine Netw1999，10，4： | 1 |
| 5 | The impact on Parkinson's disease of electrical parameter settings in STN stimulation显示文摘 | Moro E Esselink RJ Xie J | 2002 | Neurology2002，59，5： | 1 |
| 6 | Seven different genes encode a diverse mixture of isoforms of Bet v 1, the major birch pollen allergen 显示文摘 | Schenk MF Gilissen LJ Esselink GD | 2006 | BMC Genomies2006，6，4： | 1 |
| 7 | impact of industrial dough processing on structure:archeology, nuclear magnet resonance and electron microscopy study显示文摘 | E Esselink Aalst M Maliepaard | 2003 | Cereal Chemistry2003，80，4： | 1 |
| 8 | Simulating the self, assembly of Gemini (dimeric) surfactants 显示文摘 | Karaborni S Esselink K Hilbers P A | 1994 | Science1994，266，14： | 1 |
| 9 | Simulating the Self- Assembly of Gemini(Dimeric)Surfactants 显示文摘 | Karabomi S Esselink K Hilbers P A J | 1994 | Science1994，266，5183： | 1 |
| 10 | Impact of industrial dough processing on srtucture- a rheolo- gy,nuclear magnet resonance,and electron microscopy study 显示文摘 | Eddy Esselink Henrie Van Aalst Manuelle Maliepaard | 2003 | Cereal Chemistry2003，80，4： | 1 |
| 11 | A dual function for p38 MAP kinase in hematopoietic cells:involvement in apoptosis and cell activation显示文摘 | Birkenkamp K U Dokter W H Esselink M T | 1999 | Leukemia1999，13，7： | 1 |
| 12 | Computer Simulations of a Water/Oil Interface in the Presence of Micelles显示文摘 | Smit B Hilbers PAJ Esselink K | 1990 | Nature1990，348，6302： | 1 |
| 13 | Simulating the self-assembly of gemini (dimeric) surfacants显示文摘 | Karaborni S Esselink K Hilbers P A J | 1994 | Science1994，266，： | 1 |
| 14 | Leningrad Meets Amsterdam Meets Aquarius显示文摘 | Esselink B | 2001 | Language International2001，，4： | 1 |
| 15 | Simulating the self-assembly of Gemini(dimeric) surfactants显示文摘 | Karaborni S Esselink K Hilbers P A | 1994 | Sci- ence1994，266，14： | 1 |
| 16 | Identification of Cut Rose(Rosa hybrida)and Rootstock Varieties Using Robust Sequence Tagged Microsatellite Site Markers显示文摘 | Smulders M J M Vosman B | 2003 | Theor Appl Genet2003，106，： | 1 |
| 17 | Simulating the self-assembly of Gemini (dimeric) surfactants 显示文摘 | KARABORNI S ESSELINK K HILBERS P | 1994 | Science1994，266，5183： | 1 |
| 18 | Impact of industrial dough processing on structure: a rheology, nuclear magnet resonance, and electron microscopy study显示文摘 | ESSELINK AALST MALIEPAARD | 2003 | Cereal Chemistry2003，80，4： | 1 |
| 19 | Simulating the self-assembly of gemini (rlimeric) surfactants显示文摘 | Karaborni S Esselink K Hilbers P A J | 1994 | Science1994，266，5183： | 1 |
| 20 | Micropatterns in Festuca rubra-dominated salt-marsh vegetation induced by sheep grazing显示文摘 | Berg G Esselink P Groeneweg M Kathrin K | 1997 | Plant Ecology1997，132，1： | 1 |
您所在的机构暂未开通此部分的功能，请联系管理员