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1863 genomes reveal the origin and domestication of chicken显示文摘Despite the substantial role that chickens have played in human societies across the world,both the geographic and temporal origins of their domestication remain controversial.To address this issue,we analyzed 863 genomes from a worldwide sampling of chickens and representatives of all four species of wild jungle fowl and each of the five subspecies of red jungle fowl(RJF).Our study suggests that domestic chickens were initially derived from the RJF subspecies Gallus gallus spadiceus whose present-day distribution is predominantly in southwestern China,northern Thailand and Myanmar.Following their domestication,chickens were translocated across Southeast and South Asia where they interbred locally with both RJF subspecies and other jungle fowl species.In addition,our results show that the White Leghorn chicken breed possesses a mosaic of divergent ancestries inherited from other subspecies of RJF.Despite the strong episodic gene flow from geographically divergent lineages of jungle fowls,our analyses show that domestic chickens undergo genetic adaptations that underlie their unique behavioral,morphological and reproductive traits.Our study provides novel insights into the evolutionary history of domestic chickens and a valuable resource to facilitate ongoing genetic and functional investigations of the world's most numerous domestic animal.Ming-Shan Wang Mukesh Thakur Min-Sheng Peng Yu Jiang Laurent Alain Francois Frantz Ming Li Jin-Jin Zhang Sheng Wang Joris Peters Newton Otieno Otecko Chatmongkon Suwannapoom Xing Guo Zhu-Qing Zheng Ali Esmailizadeh Nalini Yasoda Hirimuthugoda Hidayat Ashari Sri Suladari Moch Syamsul Arifin Zein Szilvia Kusza Saeed Sohrabi Hamed Kharrati-Koopaee Quan-Kuan Shen Lin Zeng Min-Min Yang Ya-Jiang Wu Xing-Yan Yang Xue-Mei Lu Xin-Zheng Jia Qing-Hua Nie Susan Joy Lamont Emiliano Lasagna Simone Ceccobelli Humpita Gamaralalage Thilini Nisanka Gunwardana Thilina Madusanka Senasige Shao-Hong Feng Jing-Fang Si Hao Zhang Jie-Qiong Jin Ming-Li Li Yan-Hu Liu Hong-Man Chen Cheng Ma Shan-Shan Dai Abul Kashem Fazlul Haque Bhuiyan Muhammad Sajjad Khan Gamamada Liyanage Lalanie Pradeepa Silva Thi-Thuy Le Okeyo Ally Mwai Mohamed Nawaz Mohamed Ibrahim Megan Supple Beth Shapiro Olivier Hanotte Guojie Zhang Greger Larson Jian-Lin Han Dong-Dong Wu Ya-Ping Zhang 2020Cell Research2020,30,8:7
2移动社交网络中基于代理转发机制的轨迹隐私保护方法显示文摘K匿名技术是当前轨迹隐私保护的主流方法,但该方法也存在隐私泄露的风险。该文提出一种在移动社交网络中基于代理转发机制(BAFM)的轨迹隐私保护方法。该方法利用安全多方计算和内积安全计算进行隐私加密匹配,通过可信服务器在移动社交网络中找最匹配的用户做代理,然后由代理转发用户的请求到服务器进行查询,隐藏用户的真实轨迹与位置服务器的联系,有效保护用户的轨迹隐私。安全分析表明该方法能有效保护用户的轨迹隐私;同时,通过实验验证该方法相对K匿名更高效,能减小服务器的查询和通信开销。张少波 Md Zakirul Alam Bhuiyan 刘琴 王国军 2016电子与信息学报2016,38,9:5
3Non-invasive diagnosis of H pylori infection: Evaluation of serological tests with and without current infection marker CIM显示文摘AIM:To evaluate the performance of commercially available immunochromatographic (ICT) and immunoblot tests covering the current infection marker CIM and conventional ELISA for the diagnosis of H pylori infection in adult dyspeptic patients. METHODS:Consecutive non-treated dyspeptic patients undergoing diagnostic endoscopy were tested for H pylori infection by culture, rapid urease test, and histology of gastric biopsy specimens. Serum from 61 H pylori infected and 21 non-infected patients were tested for anti-H pylori IgG antibodies by commercial ELISA (AccuBindTM ELISA, Monobind, USA), ICT (Assure H pylori Rapid Test, Genelabs Diagnostics, Singapore), and immunoblot (Helico Blot 2.1, Genelabs Diagnostics, Singapore) assays. ICT and immunoblot kits cover CIM among other parameters and their performance with and without CIM was evaluated separately. RESULTS:Sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and accuracy of ELISA were 96.7%, 42.8%, 83.1%, 81.8%, and 82.9%, of ICT were 90.1%, 80.9%, 93.2%, 73.9%, and 87.8%, of ICT with CIM were 88.5%, 90.4%, 96.4%, 73.0%, and 89.0%, of immunoblot were 98.3%, 80.9%, 93.7%, 94.4%, and 93.9%, and of immunoblot with CIM were 98.3%, 90.4%, 96.7%, 95.0%, and 96.3%, respectively. CONCLUSION:Immunoblot with CIM had the best performance. ICT with CIM was found to be more specific and accurate than the conventional ELISA and may be useful for non-invasive diagnosis of H pylori infection.Sufi HZ Rahman M Golam Azam M Anisur Rahman MS Arfin M Mahbub Alam Tareq M Bhuiyan Nasim Ahmed Motiur Rahman Shamsun Nahar MS Hassan 2008World Journal of Gastroenterology2008,14,8:4
4Factors affecting residual exotropia after two muscle surgery for intermittent exotropia显示文摘AIM: To study the factors affecting residual exotropia(>10 PD) at 4-6wk postoperative visit following two rectus muscle surgery for intermittent exotropia [bilateral lateral rectus(LR) recession or unilateral recess resect procedure].METHODS: A retrospective chart review of patients with intermittent exotropia ≤50 PD who underwent two rectus muscle surgery in between Jan. 2011 to Dec. 2013 was performed. Possible factors were compared between patients with residual exotropia(>10 PD) and successful outcome(within 10 PD of orthotropia) at the 4-6wk postoperative visit. Effect/dose ratio was calculated by dividing the effect of surgery by the total amount(mm) of muscle surgery done.RESULTS: One hundred and fifty-seven patients with mean age of 14y(range 3-53y) were included. Twentyseven patients(17.2%) had residual exotropia at 4-6wk postoperative follow up. Age at surgery(P=0.009) and preoperative deviation for distance(P≤0.001) and near(P=0.001) were identified as important predictors of unsuccessful outcome. The occurrence of residual exotropia was not affected by amblyopia, anisometropia, lateral incomitance, pattern deviation, vertical deviation, type of exotropia or type of surgery done(recess-resect or bilateral LR recession). The effect/dose ratio was more in deviations >40 PD in the both recess-resect and bilateral LR recession type of surgery. The effect/dose ratio was less in patients with residual exotropia as compared to the successful outcome group(1.36 PD/mm vs 2.05 PD/mm in the bilateral LR recession surgery and 1.93 PD/mm vs 2.63 PD/mm in the unilateral recess-resect surgery).CONCLUSION: Residual exotropia is seen in 17% of patients after two muscle surgery for intermittent exotropia. Patients with older age and larger preoperative deviation have greater chances of developing failure of two muscle strabismus surgery for intermittent exotropia.Shailja Tibrewal Nishtha Singh Marazul Islam Bhuiyan Suma Ganesh 2017International Journal of Ophthalmology(English edition)2017,10,7:3
5Heavy metal pollution of coal mine-affected agricultural soils in the northern part of Bangladesh显示文摘Mohammad A.H. Bhuiyan Lutfar Parvez M.A. Islam Samuel B. Dampare Shigeyuki Suzuki 2009Journal of Hazardous Materials2009,,1:3
6Prediction-based energy-efficient target tracking protocol in wireless sensor networks显示文摘A prediction based energy-efficient target tracking protocol in wireless sensor networks(PET) was proposed for tracking a mobile target in terms of sensing and communication energy consumption.In order to maximize the lifetime of a wireless sensor network(WSN),the volume of messages and the time for neighbor discovery operations were minimized.The target was followed in a special region known as a face obtained by planarization technique in face-aware routing.An election process was conducted to choose a minimal number of appropriate sensors that are the nearest to the target and a wakeup strategy was proposed to wakeup the appropriate sensors in advance to track the target.In addition,a tracking algorithm to track a target step by step was introduced.Performance analysis and simulation results show that the proposed protocol efficiently tracks a target in WSNs and outperforms some existing protocols of target tracking with energy saving under certain ideal situations.BHUIYAN M.Z.A. 王国军 张力 彭勇 2010Journal of Central South University2010,17,2:3
7Design and Optimization of Interior Permanent Magnet(IPM)Motor for Electric Vehicle Applications显示文摘This paper explores some design parameters of an interior permanent magnet synchronous motor that contribute to enhancing motor performance.Various geometry parameters such as magnet dimension,machine diameter,stator teeth height,and number of poles are analyzed to compare overall torque,power,and torque ripples in order to select the best design parameters and their ranges.Pyleecan,an open-source software,is used to design and optimize the motor for electric vehicle applications.Following optimization with Non-dominated Sorting Genetic Algorithm(NSGA-Ⅱ),two designs A and B were obtained for two objective functions and the corresponding torque ripples values of the design A and B were later reduced by 32%and 77%.Additionally,the impact of different magnet grades on the output performances is analyzed.Lavanya Balasubramanian Nurul Azim Bhuiyan Asad Javied Ashraf A.Fahmy Fawzi Belblidia Johann Sienz 2023CES Transactions on Electrical Machines and Systems2023,7,2:2
8Current systematic reviews and meta-analyses of COVID-19显示文摘BACKGROUND Coronavirus disease 2019(COVID-19)has left a significant impact on the world's health,economic and political systems;as of November 20,2020,more than 57 million people have been infected worldwide,with over 1.3 million deaths.While the global spotlight is currently focused on combating this pandemic through means ranging from finding a treatment among existing therapeutic agents to inventing a vaccine that can aid in halting the further loss of life.AIM To collect all systematic reviews and meta-analyses published related to COVID-19 to better identify available evidence,highlight gaps in knowledge,and elucidate further meta-analyses and umbrella reviews that are yet to be performed.METHODS We explored studies based on systematic reviews and meta-analyses with the keyterms,including severe acute respiratory syndrome(SARS),SARS virus,coronavirus disease,COVID-19,and SARS coronavirus-2.The included studies were extracted from Embase,Medline,and Cochrane databases.The publication timeframe of included studies ranged between January 01,2020,to October 30,2020.Studies that were published in languages other than English were not considered for this systematic review.The finalized full-text articles are freely accessible in the public domain.RESULTS Searching Embase,Medline,and Cochrane databases resulted in 1906,669,and 19 results,respectively,that comprised 2594 studies.515 duplicates were subsequently removed,leaving 2079 studies.The inclusion criteria were systematic reviews or meta-analyses.860 results were excluded for being a review article,scope review,rapid review,panel review,or guideline that produced a total of 1219 studies.After screening articles were categorized,the included articles were put into main groups of clinical presentation,epi-demiology,screening and diagnosis,severity assessment,special populations,and treatment.Subsequently,there was a second subclassification into the following groups:gastrointestinal,cardiovascular,neurological,stroke,thrombosis,anosmia and dysgeusia,ocular manifestations,nephrology,cutaneous manifestations,D-dimer,lymphocyte,anticoagulation,antivirals,convalescent plasma,immunosuppressants,corticosteroids,hydroxychloroquine,renin-angiotensin-aldosterone system,technology,diabetes mellitus,obesity,pregnancy,children,mental health,smoking,cancer,and transplant.CONCLUSION Among the included articles,it is clear that further research is needed regarding treatment options and vaccines.With more studies,data will be less heterogeneous,and statistical analysis can be better applied to provide more robust clinical evidence.This study was not designed to give recommendations regarding the management of COVID-19.Mahmoud Nassar Nso Nso Mostafa Alfishawy Anastasia Novikov Salim Yaghi Luis Medina Bahtiyar Toz Sofia Lakhdar Zarwa Idrees Yungmin Kim Dawa Ongyal Gurung Raheel S Siddiqui David Zheng Mariam Agladze Vikram Sumbly Jasmine Sandhu Francisco Cuevas Castillo Nadya Chowdhury Ravali Kondaveeti Sakil Bhuiyan Laura Guzman Perez Riki Ranat Carlos Gonzalez Harangad Bhangoo John Williams Alaa Eldin Osman Joyce Kong Jonathan Ariyaratnam Mahmoud Mohamed Ismail Omran Mariely Lopez Akwe Nyabera Ian Landry Saba Iqbal Anoosh Zafar Gondal Sameen Hassan Ahmed Daoud Bahaaeldin Baraka Theo Trandafirescu Vincent Rizzo 2021World Journal of Virology2021,10,4:2
9Morphological and Genetical Variability among Rhizoctonia solani Isolates Causing Sheath Blight Disease of Rice显示文摘Eighteen isolates of Rhizoctonia solani collected from infected rice plants in four different locations of Bangladesh were studied by using morphological characters and molecular markers. Anastomosis study with a reference isolate confirmed that all the isolates belonged to R. solani. Significant variation was observed in sclerotial size, shape and distribution. Un-weighted pair group method with arithmetic mean dendrogram constructed based on the Gower's general similarity coefficient showed that these isolates were grouped into four clusters at the 0.68 similarity coefficent according to morphological characters. Cluster I was a major cluster consisting of 13 isolates, while clusters Ⅱ to Ⅳ consisted of 1 or 2 isolates. Analyses by variable number of tandem repeat and amplified fragment length polymorphism markers showed that the isolates were grouped into five and three clusters at a similarity coefficient of 0.64 and 0.69, respectively. Although most of the variability was found between isolates from different regions as expected, significant variation was observed within the isolates collected from similar agro-ecological regions. Our results suggest the presence of different races of R. solani within the same local geographic regions.Zakiah Rahman MONI Md Ansar ALI Md Shahidul ALAM Md Asif RAHMAN Md Rejwan BHUIYAN Md Salim MIAN Khandakar Md IFTEKHARUDDAULA Md Abdul LATIF Mohammad Ashik Iqbal KHAN 2016Rice science2016,23,1:2
10Geotechnical behavior of uranium mill tailings from Saskatchewan,Canada显示文摘This paper investigates the geotechnical behavior of uranium mill tailings from Saskatchewan, Canada.The 4% tailings were well-graded with 29% fines whereas the 5% and 6% tailings were gap-graded with 49% fines. All samples exhibited a negligible strength(0.4 k Pa) up to 60% solids, followed by a rapid increase. The 4% tailings exhibited a lower rate and amount of settlement than 5% and 6% tailings. The kidecreased from 10^(-2)to 10^(-4)m/s with a decrease in eifrom 16 to 4 and a decrease in ef from 8 to 4 such that 4% tailings showed one order of magnitude lower values than the 5% and 6%tailings. The settling potential decreased ten times(50%–5%) for 4% tailings and four times(60%–15%)for 5% and 6% tailings. The effective stress increased from 80 to 260 Pa in the settling tests. The 4%tailings were less prone to segregation when compared with 5% and 6% tailings. The average solids content after settling was 35% for 4% tailings, 40% for 5% tailings and 39% for 6% tailings with a solids content deviation of ±3%, ±8%, ±6%, respectively. All materials were essentially non-segregating at 40%initial solids.Bhuiyan Imteaz Azam Shahid Khaled Shifullah Landine Patrick 2016International Journal of Mining Science and Technology2016,26,3:2
11Clonal propagation of Bambusa vulgaris by leafy branch cuttings显示文摘Bambusa vulgaris Schrad ex wendl is a widely cultivated bamboo species in rural Bangladesh for its versatile uses. The vegetative propagation becomes the only viable alternative for this species because B. vulgaris does not set seed after sparse flowering, which makes seedling progenies unavailable. A low-cost propagation trial was conducted to explore the clonal propagation techniques for the species with two types of small branch cuttings, nodal leafy cuttings and tip cuttings. The cuttings, after treating with 0, 0.1%, 0.4%, and 0.8% IBA solutions, were kept in non-mist propagator to let them to root for assessing the rooting ability. The cuttings were rooted in four weeks and were allowed to grow in the polybags for 10 months under nursery condition to assess their steckling capacity. The study reveals that both types of branch cuttings are able to develop roots, shoots, to survive and to form rhizome under the nursery condition. Rooting ability of the cuttings was significantly enhanced by the application of rooting hormone - IBA. The highest rooting percentage in nodal leafy cuttings and the tip cuttings (56.67% and 51.0%, respectively) were observed in 0.8% IBA treatment, followed by 0.4% IBA and the lowest (34.3% and 30.0%, respectively) was in control. The highest number of root developed per cutting (9.77 and 8.33 in nodal leafy cuttings and the tip cuttings, respectively) was also obtained from the cuttings treated with 0.8% IBA solution, followed 0.4% IBA treatment and the lowest (3.1 and 2.1, respectively) was in the cuttings without treatment. However, the length of the longest root varied significantly neither with the cutting types nor the concentrations of IBA solution. Survival percentage of the stecklings in nursery condition was significantly enhanced by IBA.M.S. Islam M.K. Bhuiyan M. M. Hossain M.A. Hossain 2011Journal of Forestry Research2011,22,3:2
12Unsupervised method of clustering and labeling of the online product based on reviews显示文摘This paper presents an unsupervised approach to cluster reviews of products collected from Amazon and then generates its labels of each cluster.Instead of using a complete review,this paper splits a review into sentences and considers all sentences from the reviews as inputs for Clustering.Hierarchical Agglomerative Clustering(HAC)is used to cluster sentences.The approaches of cluster labeling are also unsupervised.For labeling,three different methods have been used to find a limited number of essential words for each cluster.Extracted essential words are used to construct phrases.Constructed phrases are used as labels for each cluster.This paper compares the result of the labeling method with baseline labeling.In the result evaluation,all the labeling methods outperform the baseline method.The aim of this research is cluster labeling that makes a set of labels to describe a cluster content and distinguishes the labels from other cluster labels.Md Masum Billah Mohammad Nuruzzaman Bhuiyan Md.Akterujjaman 2021International Journal of Modeling, Simulation, and Scientific Computing2021,12,2:2
13Study of crystalline behavior of heat-treated wood cellulose during treatments in water显示文摘Tariqur Rabbani Bhuiyan Nobuyuki Hirai 2005Journal of Wood Science2005,51,1:1
14Genomie relatedness of the new Maflab variants of Vibfio cholerae O1 to the classical and E1 Tor biotypes as determined by pulsed - field gel eleetrophoresis 显示文摘Safa A Bhuiyan NA /dam M 2005J Clin Micrebiol2005,43,3:1
15Desmoglein-2 and desmocollin-2 mutations in dutch arrhythmogenic right ventricular dysplasiafcardiomypathy patients: results from a muhicenter study 显示文摘Bhuiyan ZA Jongbloed JD der Smagt J v 2009Circ Cardiovasc Genet2009,2,5:1
16Carbapenem resist- ance in Acinetobacter baumannii: laboratop/ challenges, mecha- nistic insights and therapeutic strategies 显示文摘Abbott I Cerqueira GM Bhuiyan S 2013Expert RevAnti In- fect Ther2013,11,4:1
17Seismic fragility assessment of SMA-bar restrained multi-span continuous highway bridge isolated by different laminated rubber bearings in medium to strong seismic risk zones显示文摘Alan M S Bhuiyan M A R Billah A H M 2012Bulletin of Earthquake Engineering2012,10,6:1
18A compact transmit/receive switch for 2.4 GHz reader-less active RFID tag transceiver显示文摘Radio frequency identification(RFID) is a ubiquitous identification technology nowadays. An on-chip high-performance transmit/receive(T/R) switch is designed and simulated in 0.13-μm CMOS technology for reader-less RFID tag. The switch utilizes only the transistor width and length(W/L) optimization, proper gate bias resistor and resistive body floating technique and therefore,exhibits 1 d B insertion loss, 31.5 d B isolation and 29.2 d Bm 1-d B compression point(P1d B). Moreover, the switch dissipates only786.7 n W power for 1.8/0 V control voltages and is capable of switching in 794 fs. Above all, as there is no inductor or capacitor used in the circuit, the size of the switch is 0.00208 mm2 only. This switch will be appropriate for reader-less RFID tag transceiver front-end as well as other wireless transceivers operated at 2.4 GHz band.Mohammad Arif Sobhan Bhuiyan Mamun Bin Ibne Reaz Jubayer Jalil Labonnah Farzana Rahman Tae Gyu Chang 2015Journal of Central South University2015,22,2:1
19Phisphorus Recovery from Wastewater Through Struvite Formation in Fluidized Bed Reactors:A Sustainable Approach显示文摘Bhuiyan M I H Mavinic D S Koch F A 2008Chemosphere2008,57,2:1
20Microstructure and electrical properties of 5m203 doped Bi203-based ZnO varistor ceramics 显示文摘ASHRAF M A BHUIYAN A H HAKIM M A HOSSAIN M T 2011Materials Science and Engineering B2011,176,11:1
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