| 1 | Optimal resource allocation with spatiotemporal transmission discovery for efective disease control显示文摘Background:The new waves of COVID-19 outbreaks caused by the SARS-CoV-2 Omicron variant are developing rapidly and getting out of control around the world,especially in highly populated regions.The healthcare capacity(especially the testing resources,vaccination coverage,and hospital capacity)is becoming extremely insufcient as the demand will far exceed the supply.To address this time-critical issue,we need to answer a key question:How can we efectively infer the daily transmission risks in diferent districts using machine learning methods and thus lay out the corresponding resource prioritization strategies,so as to alleviate the impact of the Omicron outbreaks?Methods:We propose a computational method for future risk mapping and optimal resource allocation based on the quantitative characterization of spatiotemporal transmission patterns of the Omicron variant.We collect the publicly available data from the ofcial website of the Hong Kong Special Administrative Region(HKSAR)Government and the study period in this paper is from December 27,2021 to July 17,2022(including a period for future prediction).First,we construct the spatiotemporal transmission intensity matrices across diferent districts based on infection case records.With the constructed cross-district transmission matrices,we forecast the future risks of various locations daily by means of the Gaussian process.Finally,we develop a transmission-guided resource prioritization strategy that enables efective control of Omicron outbreaks under limited capacity.Results:We conduct a comprehensive investigation of risk mapping and resource allocation in Hong Kong,China.The maps of the district-level transmission risks clearly demonstrate the irregular and spatiotemporal varying patterns of the risks,making it difcult for the public health authority to foresee the outbreaks and plan the responses accordingly.With the guidance of the inferred transmission risks,the developed prioritization strategy enables the optimal testing resource allocation for integrative case management(including case detection,quarantine,and further treatment),i.e.,with the 300,000 testing capacity per day;it could reduce the infection peak by 87.1% compared with the population-based allocation strategy(case number reduces from 20,860 to 2689)and by 24.2% compared with the case-based strategy(case number reduces from 3547 to 2689),signifcantly alleviating the burden of the healthcare system.Conclusions:Computationally characterizing spatiotemporal transmission patterns allows for the efective risk mapping and resource prioritization;such adaptive strategies are of critical importance in achieving timely outbreak control under insufcient capacity.The proposed method can help guide public-health responses not only to the Omicron outbreaks but also to the potential future outbreaks caused by other new variants.Moreover,the investigation conducted in Hong Kong,China provides useful suggestions on how to achieve efective disease control with insufcient capacity in other highly populated countries and regions. | Jinfu Ren Mutong Liu Yang Liu Jiming Liu | 2022 | Infectious Diseases of Poverty2022，11，2： | 0 |
| 2 | Assessing the spatiotemporal malaria transmission intensity with heterogeneous risk factors:A modeling study in Cambodia显示文摘Malaria control can significantly benefit from a holistic and precise way of quantitatively measuring the transmission intensity,which needs to incorporate spatiotemporally varying risk factors.In this study,we conduct a systematic investigation to characterize malaria transmission intensity by taking a spatiotemporal network perspective,where nodes capture the local transmission intensities resulting from dominant vector species,the population density,and land cover,and edges describe the cross-region human mobility patterns.The inferred network enables us to accurately assess the transmission intensity over time and space from available empirical observations.Our study focuses on malaria-severe districts in Cambodia.The malaria transmission intensities determined using our transmission network reveal both qualitatively and quantitatively their seasonal and geographical characteristics:the risks increase in the rainy season and decrease in the dry season;remote and sparsely populated areas generally show higher transmission intensities than other areas.Our findings suggest that:the human mobility(e.g.,in planting/harvest seasons),environment(e.g.,temperature),and contact risk(coexistences of human and vector occurrence)contribute to malaria transmission in spatiotemporally varying degrees;quantitative relationships between these influential factors and the resulting malaria transmission risk can inform evidence-based tailor-made responses at the right locations and times. | Mutong Liu Yang Liu Ly Po Shang Xia Rekol Huy Xiao-Nong Zhou Jiming Liu | 2023 | Infectious Disease Modelling2023，8，1： | 0 |
您所在的机构暂未开通此部分的功能，请联系管理员