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| 1 | Genomic basis for light control of plant development显示文摘Light is one of the key environmental signals regulating plant growth and development.Therefore,understanding the mechanisms by which light controls plant development has long been of great interest to plant biologists.Traditional genetic and molecular approaches have successfully identified key regulatory factors in light signaling,but recent genomic studies have revealed massive reprogramming of plant transcriptomes by light,identified binding sites across the entire genome of several pivotal transcription factors in light signaling,and discovered the involvement of epigenetic regulation in light-regulated gene expression.This review summarizes the key genomic work conducted in the last decade which provides new insights into light control of plant development. | Jigang Li William Terzaghi Xing Wang Deng | 2012 | Protein & Cell2012，3，2： | 11 |
| 2 | Genomic Features and Regulatory Roles of Intermediate-Sized Non-Coding RNAs in Arabidopsis显示文摘在染色体宽的技术的最近的进展与各种各样的尺寸 ineukaryotes 允许几千非编码的 RNA 的鉴定,其中一些进一步被显示了在许多生物进程服务重要函数。然而在 modelplant Arabidopsis,新奇中介大小的 ncRNAs (im-ncRNAs )(50 ~ 300 nt ) 很限制了信息。由与深定序的技术使用修改隔离 strategycombined,我们全球性在 Arabidopsis 识别了 838 im-ncRNAs。多于一半(58%) 是新 ncRNA 种类,主要进化分叉。有趣地,与 5-UTR-derived 小说 im-ncRNAs 注解了 protein-codinggenes 趋于高度被表示。为 intergenic im-ncRNAs,他们比得上在幼苗的 mRNAs 的平均 abundanceswere,而是子集,在开始衰老的展出显著地更低的表示离开。进一步, intergenic im-ncRNAs 被调整由类似基因并且编码蛋白质的基因的到那些的 epigenetic 机制,和 someshowed 发展地调整了表示模式。基因屏蔽显示出的大规模颠倒 down-regulationof 很多 im-ncRNAs 在 vivo 导致了明显的分子的变化或反常发展显型,在植物生长和开发显示 im-ncRNAs 的功能的重要性。一起,我们的结果证明 thatnovel Arabidopsis im-ncRNAs 发展地被调整,功能的部件在 transcriptome.Key 词发现了: | Yuqiu Wang Xuncheng Wang Wei Deng Xiuduo Fan Ting-Ting Liu Guangming He Runsheng Chen William Terzaghi Danmeng Zhu Xing Wang Deng | 2014 | Molecular Plant2014，7，3： | 9 |
| 3 | Genome-wide association study dissects the genetic bases of salt tolerance in maize seedlings显示文摘Excess salinity is a natural stress that causes crop yield losses worldwide. The genetic bases of maize salt tolerance remain largely unknown. Here we investigated the survival rates of 445 maize natural accessions after salt treatments. A skewed distribution of the salttolerant phenotypes was observed in this population.Genome-wide association studies(GWAS) revealed 57 loci significantly associated with salt tolerance. Forty-nine candidate genes were detected from these loci. About10% of these genes were co-localized with loci from QTL mapping. Forty four percent of the candidate genes were involved in stress responses, ABA signaling,stomata division, DNA binding/transcription regulation and auxin signaling, suggesting that they are key genetic mechanisms of maize salt tolerance. Transgenic studies showed that two genes, the salt-tolerance-associatedgene 4(SAG4, GRMZM2 G077295) and SAG6(GRMZM2 G106056), which encode a protein transport protein and the double-strand break repair protein MRE11,respectively, had positive roles in plant salt tolerance,and their salt-tolerant haplotypes were revealed. The genes we identified in this study provide a list of candidate targets for further study of maize salt tolerance, and of genetic markers and materials that may be used for breeding salt-tolerance in maize. | Xi Luo Bingcai Wang Shan Gao Fei Zhang William Terzaghi Mingqiu Dai | 2019 | Journal of Integrative Plant Biology2019，61，6： | 8 |
| 4 | Enhanced Vitamin C Production Mediated by an ABA-Induced PTP-like Nucleotidase Improves Plant Drought Tolerance in Arabidopsis and Maize显示文摘Abscisic acid(ABA)is a key phytohormone that mediates environmental stress responses.Vitamin C,or L-ascorbic acid(AsA),is the most abundant antioxidant protecting against stress damage in plants.How the ABA and AsA signaling pathways interact in stress responses remains elusive.In this study,we characterized the role of a previously unidentified gene,PTPN(PTP-like Nucleotidase)in plant drought tolerance.In Arabidopsis,(AtPTPN was expressed in multiple tissues and upregulated by ABA and drought treatments.Loss-of-function mutants oiAtPTPN were hyposensitive to ABA but hypersensitive to drought stresses,whereas plants with enhanced expression AtPTPN showed opposite phenotypes to.Overexpression of maize PTPN(ZmPTPN)promoted,while knockdown oiZmPTPN inhibited plant drought tolerance,indicating conserved and positive roles of PTPN in plant drought tolerance.We found that both AtPTPN and ZmPTPN release Pi by hydrolyzing GDP/GMP/dGMP/IMP/dIMP,and that AtPTPN positively regulated AsA production via endogenous Pi content control.Consistently,overexpression of VTC2,the rate-limiting synthetic enzyme in AsA biosynthesis,promoted AsA production and plant drought tolerance,and these effects were largely dependent on AtPTPN activity.Furthermore,we demonstrated that the heat shock transcription factor HSFA6a directly binds the AtPTPN promoter and activates AtPTPN expression.Genetic analyses showed that AtPTPN is required for HSFA6a to regulate ABA and drought responses.Taken together,our data indicate that PTPN-mediated crosstalk between the ABA signaling and AsA biosynthesis pathways positively controls plant drought tolerance. | Hui Zhang Yanli Xiang Neng He Xiangguo Liu Hongbo Liu Liping Fang Fei Zhang Xiaopeng Sun Delin Zhang Xingwang Li William Terzaghi Jianbing Yan Mingqiu Dai | 2020 | Molecular Plant2020，13，5： | 7 |
| 5 | Integration of light and temperature signaling pathways in plants显示文摘As two of the most important environmental factors,light and temperature regulate almost all aspects of plant growth and development.Under natural conditions,light is accompanied by warm temperatures and darkness by cooler temperatures,suggesting that light and temperature are tightly associated signals for plants.Indeed,accumulating evidence shows that plants have evolved a wide range of mechanisms to simultaneously perceive and respond to dynamic changes in light and temperature.Notably,the photoreceptor phytochrome B(phy B)was recently shown to function as a thermosensor,thus reinforcing the notion that light and temperature signaling pathways are tightly associated in plants.In this review,we summarize and discuss the current understanding of the molecular mechanisms integrating light and temperature signaling pathways in plants,with the emphasis on recent progress in temperature sensing,light control of plant freezing tolerance,and thermomorphogenesis.We also discuss the questions that are crucial for a further understanding of the interactions between light and temperature signaling pathways in plants. | Lijuan Qi Yiting Shi William Terzaghi Shuhua Yang Jigang Li | 2022 | Journal of Integrative Plant Biology2022，64，2： | 4 |
| 6 | UV-B-induced photomorphogenesis in Arabidopsis显示文摘Ultraviolet-B(UV-B)is a relatively minor component of sunlight,but can induce stress-related physiological pro-cesses or UV-B-specifi c photomorphogenic responses in plants.In the last decade,signifi cant progress has been made in understanding the UV-B photomorphogenic pathway,including identifi cation of the key components in the pathway,molecular characterization of UV-B pho-toreceptor and perception mechanism,and elucidation of the signal transduction mechanisms from the photo-activated UV-B receptor to downstream gene expression.This review summarizes the key players identifi ed to date in the UV-B photomorphogenic pathway and their roles in mediating UV-B signal transduction. | Jigang Li Li Yang Dan Jin Cynthia D.Nezames William Terzaghi Xing Wang Deng | 2013 | Protein & Cell2013，4，7： | 4 |
| 7 | Arabidopsis DET1 Represses Photomorphogenesis in Part by Negatively Regulating DELLA Protein Abundance in Darkness显示文摘DET1 否定地在黑暗中调整 DELLA 蛋白质丰富。 | Kunlun Li Zhaoxu Gao Hang He William Terzaghi Liu-Min Fan Xing Wang Deng Haodong Chen | 2015 | Molecular Plant2015，8，4： | 4 |
| 8 | OsPKpa_1 encodes a plastidic pyruvate kinase that affects starch biosynthesis in the rice endosperm显示文摘Pyruvate kinase(PK) is a key enzyme in glycolysis and carbon metabolism. Here, we isolated a rice(Oryza sativa) mutant, w59, with a white-core floury endosperm. Map-based cloning of w59 identified a mutation in OsPKpa_1, which encodes a plastidic isoform of PK(PKp). OsPKpa_1 localizes to the amyloplast stroma in the developing endosperm, and the mutation of OsPKpa_1 in w59 decreases the plastidic PK activity, resulting in dramatic changes to the lipid biosynthesis in seeds. The w59 grains were also characterized by a marked decrease in starch content. Consistent with a decrease in number and size of the w59 amyloplasts, large empty spaces were observed in the central region of the w59 endosperm, atthe early grain-filling stage. Moreover, a phylogenetic analysis revealed four potential rice isoforms of OsPKp. We validated the in vitro PK activity of these OsPKps through reconstituting active PKp complexes derived from inactive individual OsPKps, revealing the heteromeric structure of rice PKps, which was further confirmed using a protein–protein interaction analysis. These findings suggest a functional connection between lipid and starch synthesis in rice endosperm amyloplasts. | Yue Cai Wenwei Zhang Jie Jin Xiaoming Yang Xiaoman You Haigang Yan Liang Wang Jie Chen Jiahuan Xu Weiwei Chen Xingang Chen Jing Ma Xiaojie Tang Fei Kong Xiaopin Zhu Guoxiang Wang Ling Jiang William Terzaghi Chunming Wang Jianmin Wan | 2018 | Journal of Integrative Plant Biology2018，60，11： | 3 |
| 9 | PHYTOCHROME-INTERACTING FACTORS Interact with the ABA Receptors PYL8 and PYL9 to Orchestrate ABA Signaling in Darkness显示文摘PHYTOCHROME-INTERACTING FACTORS(PIFs)are a group of basic helix-loop-helix transcription factors that can physically interact with photoreceptors,including phytochromes and cryptochromes.It was previously demonstrated that PIFs accumulated in darkness and repressed seedling photomorphogenesis,and that PIFs linked different photosensory and hormonal pathways to control plant growth and development.In this study,we show that PIFs positively regulate the ABA signaling pathway during the seedling stage specifically in darkness.We found that PIFs positively regulate ABI5 transcript and protein levels in darkness in response to exogenous ABA treatment by binding directly to the G-box motifs in the ABI5 promoter.Consistently,PIFs and the G-box motifs in the ABI5 promoter determine ABI5 expression in darkness,and overexpression of ABI5 could rescue the ABA-insensitive phenotypes of pifq mutants in the dark.Moreover,we discovered that PIFs can physically interact with the ABA receptors PYL8 and PYL9,and that this interaction is not regulated by ABA.Further analyses showed that PYL8 and PYL9 promote PIF4 protein accumulation in the dark and enhance PIF4 binding to the ABI5 promoter,but negatively regulate PIF4-mediated ABI5 activation.Taken together,our data demonstrate that PIFs interact with ABA receptors to orchestrate ABA signaling in darkness by controlling ABI5 expression,providing new insights into the pivotal roles of PIFs as signal integrators in regulating plant growth and development. | Lijuan Qi Shan Liu Cong Li Jingying Fu Yanjun Jing Jinkui Cheng Hong Li Dun Zhang Xiaoji Wang Xiaojing Dong Run Han Bosheng Li Yu Zhang Zhen Li William Terzaghi Chun-Peng Song Rongcheng Lin Zhizhong Gong Jigang Li | 2020 | Molecular Plant2020，13，3： | 3 |
| 10 | Integration of Cytological Features with Molecular and Epigenetic Properties of Rice Chromosome 4显示文摘米饭染色体 4 在包含不同颜色的一半以内有八主要包含不同颜色的旋钮并且这个组织与 chromosomal 水平 transcriptional 活动相关,这被报导了。更好理解这个 chromosomal 组织,我们基于基因模型的各种各样的类型的统计分发创造了一个模型把染色体 4 划分成与 cytological 染色相应的 17 euchromatic 和包含不同颜色的区域。在原处,杂交(鱼) 试验使用一套细菌的人工的染色体(用绳子拖的平底渡船) 的荧光从染色体 4 克隆把所有 18 克隆放在模型预言的区域。而这二修正的底层在包含不同颜色的区域被检测, chromatin-immunoprecipitation (薄片) 在薄片上检测的 H3K4 di-methylation 和 tri-methylation 的提高的层次与 euchromatic 区域被相关。小 RNA 更充满包含不同颜色的区域。为了验证这些调查结果, H3K4 trimethylation, H3K9 acetylation, H4K12 acetylation,和 H3K9, 19 单个基因的 di-methylation 和 tri-methylation 被 ChIPPCR 测量。当在 euchromatic 区域的基因提高了另外的三修正的层次时,在包含不同颜色的区域的基因提高了 H3K9 di-methylation 和 tri-methylation。我们另外用限制酶 McrBC, HapII,和 Msp 的这些基因的 assayed cytosine methylation 我。这分析显示了位于包含不同颜色的区域的 transposable 元素和一些基因的那 cytosines 当另外的基因的 cytosines 是 unmethylated 时,是 methylated。这些结果建议那项本地 transcriptional 活动可以反映染色体的相应部分的组织。他们也显示那条 epigenetic 规定与 transcriptional 活动在相关 chromosomal 组织起一个重要作用。 | Ben-Liang Yin Lan GUO Dong-Fen Zhang William Terzaghi Xiang-Feng Wang Ting-Ting Liu Hang He Zhu-Kuan Cheng Xing Wang Deng | 2008 | Molecular Plant2008，1，5： | 2 |
| 11 | Large retaining wall tests显示文摘 | Terzaghi K | 1934 | Eng News Record1934，11，2： | 1 |
| 12 | Arthroscopic four-step treatment for chronic ankle instability显示文摘 | Ventura A Terzaghi C Legnani C | 2012 | Foot Ankle Int2012，33，1： | 1 |
| 13 | Arthroscopic four step treatment for chronic ankle instability显示文摘 | Ventura A Terzaghi C Legnani C | 2012 | Foot Ankle Int2012，33，1： | 1 |
| 14 | Die Berechnung der Durchlassigkeitsziffer des Tones aus dem Verlauf der Hydrodynamischen Spannungserscheinungen显示文摘 | TERZAGHI K | 1923 | Akademie der Wissenschaften in Wien Sitzungsberichte Mathematisch-Naturwissens-chaftliche Klasse Part Ⅱa1923，132，34： | 1 |
| 15 | Charac- terization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4- RING E3 ubiquitin ligases 显示文摘 | Lee JH Terzaghi W Gusmaroli G | 2008 | Plant Cell2008，20，： | 1 |
| 16 | Physical-chemical and ecotoxicological evaluation of water based drilling fluids used in Italian off-shore显示文摘 | Terzaghi C Buffagni M Cantelli D Bonfanti P Camatini M | 1998 | Chemosphere1998，37，1415： | 1 |
| 17 | A Medicago truncatula phosphate transporter indispensable for the arbuscular mycorrhizal symbiosis显示文摘 | Javot H Penmetsa R V Terzaghi N | 2007 | Proceedings of the National Academy of Sciences2007，104，5： | 1 |
| 18 | Record earth pressure testing machine显示文摘 | TERZAGHI K | 1932 | Engineering News Record1932，109，29： | 1 |
| 19 | Der Grundbruch an Stauwerken und seine Verhuetung显示文摘 | Terzaghi K | 1922 | Die Wasserkraft1922，17，： | 1 |
| 20 | Evaluation of Coefficients of Subgrade Reaction 显示文摘 | TERZAGHI K | 1955 | Geotechnique1955，5，4： | 1 |
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