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| 1 | Genetic diversity and construction of core collection in Chinese wheat genetic resources显示文摘Genetic diversity among 5029 accessions representing a proposed Chinese wheat core collection was analyzed using 78 pairs of fluorescent microsatellite (SSR) primers mapped to 21 chromosomes. A stepwise hierarchical sampling strategy with priority based on 4×105 SSR data-points was used to construct a core collection from the 23090 initial collections. The core collection consisted of 1160 accessions, including 762 landraces, 348 modern varieties and 50 introduced varieties. The core ac-counts for 23.1% of the 5029 candidate core accessions and 5% of the 23090 initial collections, but retains 94.9% of alleles from the candidate collections and captures 91.5% of the genetic variation in the initial collections. These data indicate that it is possible to maintain genetic diversity in a core collection while retaining fewer accessions than the accepted standard, i.e., 10% of the initial collections captured more than 70% of their genetic diversity. Estimated genetic representation of the core con-structed by preferred sampling (91.5%) is much higher than that by random sampling (79.8%). Both mean genetic richness and genetic diversity indices of the landraces were higher than those of the modern varieties in the core. Structure and principal coordinate analysis revealed that the landraces and the modern varieties were two relatively independent subpopulations. Strong genetic differentiation associated with ecological environments has occurred in the landraces, but was relatively weak in the modern cultivars. In addition, a mini-core collection was constructed, which consisted of 231 accessions with an estimated 70% representation of the genetic variation from the initial collections. The mini-core has been distributed to various research and breeding institutes for detailed phenotyping and breeding of genetic introgression lines. | HAO ChenYang DONG YuChen WANG LanFen YOU GuangXia ZHANG HongNa GE HongMei JIA JiZeng ZHANG XueYong | 2008 | Chinese Science Bulletin2008，53，10： | 27 |
| 2 | Genetic diversity in Chinese modern wheat varieties revealed by microsatellite markers显示文摘Genetic diversity of 1680 modern varieties in Chinese candidate core collections was analyzed at 78 SSR loci by fluorescence detection system. A total of 1336 alleles were detected, of which 1253 alleles could be annotated into 71 loci. For these 71 loci, the alleles ranged from 4 to 44 with an average of 17.6, and the PIC values changed from 0.19 to 0.89 with an average of 0.69. (1) In the three genomes of wheat, the average genetic richness was B>A>D, and the genetic diversity indexes were B>D>A. (2) Among the seven homoeologous groups, the average genetic richness was 2=7>3>4>6>5>1, and the genetic diversity indexes were 7>3>2>4>6>5>1. As a whole, group 7 possessed the highest genetic diversity, while groups 1 and 5 were the lowest. (3) In the 21 wheat chromosomes, 7A, 3B and 2D possessed much higher genetic diversity, while 2A, 1B, 4D, 5D and 1D were the lowest. (4) The highest average genetic diversity index existed in varieties bred in the 1950s, and then it declined continually. However, the change tendency of genetic diversity among decades was not greatly sharp. This was further illustrated by changes of the average genetic distance between varieties. In the 1950s it was the largest (0.731). Since the 1960s, it has decreased gradually (0.711, 0.706, 0.696, 0.695). The genetic base of modern varieties is becoming narrower and narrower. This should be given enough attention by breeders and policy makers. | HAO Chenyang, WANG Lanfen, ZHANG Xueyong, YOU Guangxia, DONG Yushen, JIA Jizeng, LIU Xu, SHANG Xunwu, LIU Sancai & CAO Yongsheng Key Laboratory of Crop Germplasm & Biotechnology, MOA, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China Agronomy College, Gansu Agricultural University, Lanzhou 730070, China | 2006 | Science China(Life Sciences)2006，49，3： | 19 |
| 3 | Wheat genomic study for genetic improvement of traits in China显示文摘Bread wheat(Triticum aestivum L.)is a major crop that feeds 40%of the world’s population.Over the past several decades,advances in genomics have led to tremendous achievements in understanding the origin and domestication of wheat,and the genetic basis of agronomically important traits,which promote the breeding of elite varieties.In this review,we focus on progress that has been made in genomic research and genetic improvement of traits such as grain yield,end-use traits,flowering regulation,nutrient use efficiency,and biotic and abiotic stress responses,and various breeding strategies that contributed mainly by Chinese scientists.Functional genomic research in wheat is entering a new era with the availability of multiple reference wheat genome assemblies and the development of cutting-edge technologies such as precise genome editing tools,highthroughput phenotyping platforms,sequencing-based cloning strategies,high-efficiency genetic transformation systems,and speed-breeding facilities.These insights will further extend our understanding of the molecular mechanisms and regulatory networks underlying agronomic traits and facilitate the breeding process,ultimately contributing to more sustainable agriculture in China and throughout the world. | Jun Xiao Bao Liu Yingyin Yao Zifeng Guo Haiyan Jia Lingrang Kong Aimin Zhang Wujun Ma Zhongfu Ni Shengbao Xu Fei Lu Yuannian Jiao Wuyun Yang Xuelei Lin Silong Sun Zefu Lu Lifeng Gao Guangyao Zhao Shuanghe Cao Qian Chen Kunpu Zhang Mengcheng Wang Meng Wang Zhaorong Hu Weilong Guo Guoqiang Li Xin Ma Junming Li Fangpu Han Xiangdong Fu Zhengqiang Ma Daowen Wang Xueyong Zhang Hong-Qing Ling Guangmin Xia Yiping Tong Zhiyong Liu Zhonghu He Jizeng Jia Kang Chong | 2022 | Science China(Life Sciences)2022，65，9： | 9 |
| 4 | The wheat MYB-related transcription factor TaMYB72 promotes flowering in rice显示文摘Through large-scale transformation analyses, Ta MYB72 was identified as a flowering time regulator in wheat. Ta MYB72 is a MYB family transcription factor localized to the nucleus. Three Ta MYB72 homologs,Ta MYB72-A, Ta MYB72-B and Ta MYB72-D, cloned from hexaploid wheat were mapped to the short arm of the group 6 chromosomes. Under the long-day conditions,over-expression of the Ta MYB72 in rice shortened the flowering time by approximately 12 d. Expression analyses suggest that Ta MYB72 may function through upregulation of florigen genes Hd3 a and RFT1. | Lichao Zhang Guoxiang Liu Jizeng Jia Guangyao Zhao Chuan Xia Lina Zhang Fu Li Qiang Zhang Chunhao Dong Shuangcheng Gao Longzhi Han Xiuping Guo Xin Zhang Jinxia Wu Xu Liu Xiuying Kong | 2016 | Journal of Integrative Plant Biology2016，58，8： | 8 |
| 5 | Genomics-based plant germplasm research(GPGR)显示文摘Plant germplasm underpins much of crop genetic improvement.Millions of germplasm accessions have been collected and conserved ex situ and/or in situ,and the major challenge is now how to exploit and utilize this abundant resource.Genomics-based plant germplasm research(GPGR) or 'Genoplasmics' is a novel cross-disciplinary research field that seeks to apply the principles and techniques of genomics to germplasm research.We describe in this paper the concept,strategy,and approach behind GPGR,and summarize current progress in the areas of the definition and construction of core collections,enhancement of germplasm with core collections,and gene discovery from core collections.GPGR is opening a new era in germplasm research.The contribution,progress and achievements of GPGR in the future are predicted. | Jizeng Jia Hongjie Li Xueyong Zhang Zichao Li Lijuan Qiu | 2017 | The Crop Journal2017，5，2： | 7 |
| 6 | Identification and Validation of a Major Quantitative Trait Locus for Slow-rusting Resistance to Stripe Rust in Wheat显示文摘Stripe (yellow) rust,caused by Puccinia striiformis Westend.f.sp.tritici Eriks (Pst),is one of the most important wheat (Triticum aestivum L.) diseases and causes significant yield losses.A recombinant inbred (RI) population derived from a cross between Yanzhan 1 and Xichang 76-9 cultivars was evaluated for resistance to wheat stripe rust strain CYR32 at both the seedling and adult plant stages.Four resistance quantitative trait loci (QTLs) were detected in this population,in which the major one,designated as Yrq1,was mapped on chromosome 2DS.The strategy of using the Brachypodium distachyon genome,wheat expressed sequence tags and a draft DNA sequences (scaffolds) of the D-genome (Aegilops tauschii Coss.) for the development of simple sequence repeat (SSR) markers was successfully used to identify 147 SSRs in hexaploid wheat.Of the 19 polymorphic SSRs in the RI population,17 SSRs were mapped in the homeologous group 2 chromosomes near Yrq1 region and eight SSRs were genetically mapped in the 2.7 cM region of Yrq1,providing abundant DNA markers for fine-mapping of Yrq1 and marker-assisted selection in wheat breeding program.The effectiveness of Yrq1 was validated in an independent population,indicating that this resistance QTL can be successfully transferred into a susceptible cultivar for improvement of stripe rust resistance. | Xiaohua Cao Jianghong Zhou Xiaoping Gong Guangyao Zhao Jizeng Jia Xiaoquan Qi | 2012 | Journal of Integrative Plant Biology2012，54，5： | 5 |
| 7 | Haplotype variation of Green Revolution gene Rht-D1 during wheat domestication and improvement显示文摘Green Revolution made a substantial contribution to wheat yields worldwide in the 1960 s and 1970 s. It is of great importance to analyze the haplotype variation of Rht-D1, the Green Revolution gene, during wheat(Triticum aestivum L.)domestication and breeding to understand its evolution and function in wheat breeding history. In this study, the Rht-D1 and its flanking regions were sequenced and single nucleotide polymorphisms were detected based on a panel of 45 accessions of Aegilops tauschii, 51 accessions of landraces and 80 accessions of commercial varieties. Genetic diversity in the wild accessions was much higher than that in the varieties and higher than that reported previously. Seven haplotypes(Hapl I to Hapl VII) of Rht-D1 were identified and their evolutionary relationships were proposed. In addition to the well-known Green Revolution allele Rht-D1b, Hapl VII(an allele Rht-D1k) was identified in early breeding varieties, which reduced plant height by 16%. The results suggested that Rht-D1k had been used in breeding before the Green Revolution and made a great contribution to wheat production worldwide.Based on the breeding history and molecular evidence, we proposed that the wheat Green Revolution in China and International Maize and Wheat Improvement Center(CIMMYT)occurred independently. | Chihong Zhang Lifeng Gao Jiaqiang Sun Jizeng Jia Zhenglong Ren | 2014 | Journal of Integrative Plant Biology2014，56，8： | 5 |
| 8 | Haplotype variations in QTL for salt tolerance in Chinese wheat accessions identified by marker-based and pedigree-based kinship analyses显示文摘Most modern wheat cultivars were selected on the basis of yield-related indices measured under optimal fertilizer and irrigation inputs.With climate change,land degradation and salinity caused by sea water encroachment,wheat is increasingly subjected to environmental stress.Moreover,expanding urbanization increasingly encroaches upon prime agricultural land in countries like China,and alternative cropping areas must be found.Some of these areas have moderate constraining factors,such as salinity.Therefore,it is important to investigate whether current genetic materials and breeding procedures are maintaining adequate variability to address future problems caused by abiotic stress.In this study,a panel of 307 wheat accessions,including local landraces,exotic cultivars used in Chinese breeding programs and Chinese cultivars released during different periods since1940,were subjected to a genome-wide association study to dissect the genetic basis of salinity tolerance.Both marker-based and pedigree-based kinship analyses revealed that favorable haplotypes were introduced in some exotic cultivars as well as a limited number of Chinese landraces from the 1940 s.However,improvements in salinity tolerance during modern breeding are not as obvious as that of yield.To broaden genetic diversity for increasing salt tolerance,there is a need to refocus attention on local landraces that have high degrees of salinity tolerance and carry rare favorable alleles that have not been exploited in breeding. | Shizhou Yu Jianhui Wu Meng Wang Weiming Shi Guangmin Xia Jizeng Jia Zhensheng Kang Dejun Han | 2020 | The Crop Journal2020，8，6： | 4 |
| 9 | Wavelet solutions of Burgers' equation with high Reynolds numbers显示文摘A wavelet method is proposed to solve the Burgers’equation.Following this method,this nonlinear partial differential equation is first transformed into a system of ordinary differential equations using the modified wavelet Galerkin method recently developed by the authors.Then,the classical fourth-order explicit Runge–Kutta method is employed to solve the resulting system of ordinary differential equations.Such a wavelet-based solution procedure has been justified by solving two test examples:results demonstrate that the proposed method has a much better accuracy and efficiency than many other existing numerical methods,and whose order of convergence can go up to 5.Most importantly,our results also indicate that the present wavelet method can readily deal with those fluid dynamics problems with high Reynolds numbers. | LIU XiaoJing ZHOU YouHe ZHANG Lei WANG JiZeng | 2014 | Science China(Technological Sciences)2014，57，7： | 4 |
| 10 | APPLICATIONS OF WAVELET GALERKIN FEM TO BENDING OF PLATE STRUCTURE显示文摘A kind of calculating method for high order differentials expanded by the wavelet scal-ing functions and the integral of their product used in Galerkin FEM is proposed,so that we can usethe wavelet Galerkin FEM to solve boundary-value differential equations with orders higher than two.To combine this method with the Generalized Gaussian integral method in wavelet theory,we can findthat this method has many merits in solving mechanical problems,such as the bending of plates andthose with variable thickness.The numerical results show that this method is accurate. | Zhou Youhe Wang Jizeng Zheng Xiaojing | 1999 | Acta Mechanica Solida Sinica1999，12，2： | 4 |
| 11 | A intervarietal genetic map and QTL analysis for yield traits in wheat显示文摘 | Sishen Li Jizeng Jia Xianyun Wei Xiaocun Zhang Linzhi Li Haimei Chen Yuding Fan Haiyan Sun Xinhua Zhao Tiandong Lei Yunfong Xu Fangshan Jiang Honggang Wang Lihui Li | 2007 | Molecular Breeding2007，，2： | 3 |
| 12 | A WAVELET METHOD FOR BENDING OF CIRCULAR PLATE WITH LARGE DEFLECTION显示文摘A wavelet method for solving strongly nonlinear boundary value problems is described, which has been demonstrated early to have a convergence rate of order 4, almost independent of the nonlinear intensity of the equations. By using such a method, we study the bending problem of a circular plate with arbitrary large deflection. As the deflection increases,the bending behavior usually exhibits a so-called plate-to-membrane transition. Capturing such a transition has ever frustrated researchers for decades. However, without introducing any additional treatment, we show in this study that the proposed wavelet solutions can naturally cover the plate-membrane transition region as the plate deflection increases. In addition, the high accuracy and efficiency of the wavelet method in solving strongly nonlinear problems is numerically confirmed, and applicable scopes for the linear, the membrane and the von Karman plate theories are identified with respect to the large deformation bending of circular plates. | Xiaomin Wang Xiao jing Liu Jizeng Wang Youhe Zhou | 2015 | Acta Mechanica Solida Sinica2015，28，1： | 3 |
| 13 | Creep effect on cellular uptake of viral particles显示文摘Receptor diffusion on cell membrane is usually believed as a major factor that controls how fast a virus can enter into host cell via endocytosis.However,when receptors are densely distributed around the binding site so that receptor recruiting through diffusion is no longer energetically favorable,we thus hypothesize that another effect,the creep deformation of cytoskeleton,might turn to play the dominant role in relaxing the engulfing process.In order to deeply understand this mechanism,we propose a viscoelastic model to investigate the dynamic process of virus engulfment retarded by the creep deformation of cytoskeleton and driven by the binding of ligand-receptor bonds after overcoming resistance from elastic deformation of lipid membrane and cytoskeleton.Based on this new model,we predict the lower bound of the ligand density and the range of virus size that allows the complete engulfment,and an optimal virus size corresponding to the smallest wrapping time.Surprisingly,these predictions can be reduced to the previous predictions based on simplified membrane models by taking into account statistical thermodynamic effects.The results presented in this study may be of interest to toxicologists,nanotechnologists,and virologists. | Jizeng Wang Long Li Youhe Zhou | 2014 | Chinese Science Bulletin2014，59，19： | 3 |
| 14 | Improving SIMD Utilization with Thread-Lane Shuffled Compaction in GPGPU显示文摘GPGPUs adopt SIMT execution model in which each logical thread in a warp corresponds to a SIMD lane while can still follow an independent control flow.When a branch divergence appears and threads within a warp take different execution paths, GPGPUs have to execute each path serially through SIMD lane masking, which potentially decreases the SIMD utilization and performance. We propose an efficient thread compaction mechanism to handle branch divergence with a novel register file structure. We also develop a new thread scheduling policy cooperating with our compaction mechanism. The simulation results show that our approach improves the SIMD utilization up to 74.4% and achieves a maximum 11.1%performance speedup with small hardware overhead. | LI Bingchao WEI Jizeng GUO Wei SUN Jizhou | 2015 | Chinese Journal of Electronics2015，24，4： | 2 |
| 15 | Coiflet solution of strongly nonlinear p-Laplacian equations显示文摘A new boundary extension technique based on the Lagrange interpolating polynomial is proposed and used to solve the function approximation defined on an interval by a series of scaling Coiflet functions, where the coefficients are used as the single-point samplings. The obtained approximation formula can exactly represent any polynomials defined on the interval with the order up to one third of the length of the compact support of the adopted Coiflet function. Based on the Galerkin method, a Coiflet-based solution procedure is established for general two-dimensional p-Laplacian equations, following which the equations can be discretized into a concise matrix form.As examples of applications, the proposed modified wavelet Galerkin method is applied to three typical p-Laplacian equations with strong nonlinearity. The numerical results justify the efficiency and accuracy of the method. | Cong XU Jizeng WANG Xiaojing LIU Lei ZHANG Youhe ZHOU | 2017 | Applied Mathematics and Mechanics(English Edition)2017，38，7： | 2 |
| 16 | Wheat MADS-box gene TaSEP3-D1 negatively regulates heading date显示文摘The MADS-box gene plays an important role in regulating plant growth and development.In this study,a SEP3-like MADS-box gene TaSEP3-1 was isolated from bread wheat.The expression patterns of the three homoeologs TaSEP3-A1,TaSEP3-B1,and TaSEP3-D1 were similar,and higher expression levels were detected in floral organs and developing kernels.TaSEP3-D1 was located in the nucleus and cytoplasm and possessed transactivation activity in yeast.Homoeolog sequence polymorphism analysis identified four,three,and four haplotypes of TaSEP3-A1,TaSEP3-B1,and TaSEP3-D1,respectively,and the haplotypes of TaSEP3-D1 had larger effects on agronomic traits than those of TaSEP3-A1 and TaSEP3-B1.D1_h4,significantly associated with heading date,plant height,and other yield-related traits,was the favored haplotype of TaSEP3-D1.Transgenic wheat genotypes overexpressing TaSEP3-D1 exhibited delayed heading and reduced plant height,indicating a role in regulating heading date and plant development.These results shed light on the role of TaSEP3-D1 in wheat plant development.The favored haplotype of TaSEP3-D1 can be applied in breeding to improve plant architecture and yield in wheat. | Lei Zhang Hao Zhang Linyi Qiao Lingfeng Miao Dong Yan Pan Liu Guangyao Zhao Jizeng Jia Lifeng Gao | 2021 | The Crop Journal2021，9，5： | 2 |
| 17 | Diffusive-stochastic-viscoelastic model on specific adhesion of viscoelastic solids via molecular bonds显示文摘A diffusive-stochastic-viscoelastic model is proposed for the specific adhesion of viscoelastic solids via stochastically formed molecular bonds. In this model, we assumed that molecular level behaviours, including the diffusion of mobile adhesion molecules and stochastic reaction between adhesion molecules and binding sites, obey the Markovian stochastic processes, while mesoscopic deformations of the viscoelastic media are governed by continuum mechanics. Through Monte Carlo simulations of this model, we systematically investigated how the competition between time scales of molecular diffusion, reaction, and deformation creep of the solids may influence the lifetime and dynamic strength of the adhesion. We revealed that there exists an optimal characteristic time of molecule diffusion corresponding to the longest lifetime and largest adhesion strength, which is in good agreement with experimental observed characteristic time scales of molecular diffusion in cell membranes. In addition, we identified that the media viscosity can significantly increase the lifetime and dynamic strength, since the deformation creep and stress relaxation can effectively reduce the concentration of interfacial stress and increases the rebinding probability of molecular bonds. | Kuncheng He Long Li Jizeng Wang | 2019 | Acta Mechanica Sinica2019，35，2： | 2 |
| 18 | Integration of QTL detection and marker assisted selection for improving resistance to Fusarium head blight and important agronomic traits in wheat显示文摘Fusarium head blight(FHB), caused by Fusarium graminearum, is one of the most destructive wheat(Triticum aestivum L.) diseases worldwide. Identification of quantitative trait loci(QTL) conferring FHB resistance followed by marker assisted selection(MAS) is an efficient approach to breed FHB-resistant varieties. In this study, 38 additive QTL and 18 pairs of epistatic QTL for FHB resistance were detected in four environments using a population of recombinant inbred lines(RILs) derived from varieties Neixiang 188 and Yanzhan 1. Six QTL clusters were located on chromosomes 2D, 4B, 4D, 5A, 5D and 7B, suggesting possible polytrophic functions. Six elite lines with good FHB resistance and agronomic traits were selected from the same population using the associated markers. Our results suggest that MAS of multiple QTL will be effective and efficient in wheat breeding. | Chao Lv Yanxia Song Lifeng Gao Qin Yao Ronghua Zhou Rugen Xu Jizeng Jia | 2014 | The Crop Journal2014，2，1： | 2 |
| 19 | Hybrid System Level Modeling and Implementation of Configurable Processor for SoC显示文摘 | GUO Wei WEI Jizeng MA Zijiao WANG Zhenghua LIU Zhuangli | 2010 | Chinese Journal of Electronics2010，19，2： | 2 |
| 20 | A Novel Architecture of Special Arithmetic Function Unit for Area-Efficient Programmable Vertex Shader显示文摘 | CHANG Yisong WEI Jizeng ZHAO Guoyu GUO Wei SUN Jizhou | 2013 | Chinese Journal of Electronics2013，22，3： | 2 |
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