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| 1 | A draft sequence of the rice (Oryza sativa ssp. indica) genome显示文摘The sequence of the rice genome holds fundamental information for its biology, including physiology, genetics, development, and evolution, as well as information on many beneficial phenotypes of economic significance. Using a 'whole genome shotgun' approach, we have pro-duced a draft rice genome sequence of Oryza sativa ssp. in-dica, the major crop rice subspecies in China and many other regions of Asia. The draft genome sequence is constructed from over 4.3 million successful sequencing traces with an accumulative total length of 2214.9 Mb. The initial assembly of the non-redundant sequences reached 409.76 Mb in length, based on 3.30 million successful sequencing traces with a total length of 1797.4 Mb from an indica variant cultivar 93-11, giving an estimated coverage of 95.29% of the rice genome with an average base accuracy of higher than 99%. The coverage of the draft sequence, the randomness of the sequence distribution, and the consistency of BIG-ASSEM-BLER, a custom-designed software package | YU Jun, HU Songnian, WANG Jun,LI Songgang WONG Ka-Shu Gane, LIU Bin,DENG Yajun, DAI Li, ZHOU Yan,ZHANG Xiuqing, CAO Mengliang, LIU Jing,SUN Jiandong , TANG Jiabin, CHEN Yanjiong,HUANG Xiaobing, LIN Wei, YE Chen, TONG Wei,CONG Lijuan, GENG Jianing, HAN Yujun, LI Lin,LI Wei, HU Guangqiang, HUANG Xiangang,LI Wenjie, LI Jian, LIU Zhanwei, LI Long,LIU Jianping, Ql Qiuhui, LIU Jinsong, LI Li,WANG Xuegang, LU Hong, WU Tingling,ZHU Miao, Nl Peixiang, HAN Hua, DONG Wei,REN Xiaoyu, FENG Xiaoli, GUI Peng,LI Xianran, WANG Hao, XU Xin, ZHAI Wenxue,XU Zhao, ZHANG Jinsong, HE Sijie,ZHANG Jianguo, XU Jichen, ZHANG Kunlin,ZHENG Xianwu, DONG Jianhai, ZENG Wanyong,TAO Lin, CHEN Xuewei, HE Jun, LIU Daofeng,TIAN Wei, TIAN Chaoguang, XIA Hongai,LI Gang, GAO Hui, LI Ping, CHEN Wei ,WANG Xudong, ZHANG Yong, HU Jianfei,WANG Jing, LIU Song, YANG Jian,ZHANG Guangyu, XIONG Yuqing, LI Zhijie,MAO Long, ZHOU Chengshu, ZHU Zhen,CHEN Runsheng, HAO Bailin,ZHENG Weimou, CHEN Shouyi, QUO Wei,LI Guojie, LIU Siqi, HUANG Guyang,TAO Ming, WANG Jian, ZHU Lihuang,YUAN Longping& YANG HuanmingBeijing Genomics Institute/Center of Genomics & Bioinformatics, Chinese Academy of Sciences, Beijing 101300, China Hangzhou Genomics Institute/Institute of Bioinformatics of Zhejiang University/Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, China Institute of Genetics, Chinese Academy of Sciences, Beijing 100101, China National Hybrid Rice R & D Center, Changsha 410125, China Laboratory of Bioinformatics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China College of Life Sciences, Peking University, Beijing 100871, China Institute of Theoretical Physics, Chinese Academy of Sciences, Beijing 1Q0080, China Digital China Ltd., Beijing 100080, China Institute of Computing Technology, Chinese Academy of Sciences, Beijing 100080, China Medical College, Xi’an Jiaotong University, Xi’an 710061, ChinaThese authors contributed equally to this work.Corresponding author.Corresponden | 2001 | Chinese Science Bulletin2001，46，23： | 6 |
| 2 | Bistratal Au@Bi2S3 nanobones for excellent NIR-triggered/multimodal imaging-guided synergistic therapy for liver cancer显示文摘To fabricate a highly biocompatible nanoplatform enabling synergistic therapy and real-time imaging,novel Au@Bi2S3 core shell nanobones(NBs)(Au@Bi2S3 NBs)with Au nanorods as cores were synthesized.The combination of Au nanorods with Bi2S3 film made the Au@Bi2S3 NBs exhibit ultrahigh photothermal(PT)conversion efficiency,remarkable photoacoustic(PA)imaging and high computed tomography(CT)performance;these Au@Bi2S3 NBs thus are a promising nanotheranostic agent for PT/PA/CT imaging.Subsequently,poly(N-vinylpyrrolidone)-modified Au@Bi2S3 NBs(Au@Bi2S3-PVP NBs)were successfully loaded with the anticancer drug doxorubicin(DOX),and a satisfactory pH sensitive release profile was achieved,thus revealing the great potential of Au@Bi2S3-PVP NBs in chemotherapy as a drug carrier to deliver DOX into cancer cells.Both in vitro and in vivo investigations demonstrated that the Au@Bi2S3-PVP NBs possessed multiple desired features for cancer therapy,including extremely low toxicity,good biocompatibility,high drug loading ability,precise tumor targeting and effective accumulation.Highly efficient ablation of the human liver cancer cell HepG2 was achieved through Au@Bi2S3-PVP NB-mediated photothermal therapy(PTT).As both a contrast enhancement probe and therapeutic agent,Au@Bi2S3-PVP NBs provided outstanding NIR-triggered multi-modal PT/PA/CT imaging-guided PTT and effectively inhibited the growth of HepG2 liver cancer cells via synergistic chemo/PT therapy. | Ruizhuo Ouyang Penghui Cao Pengpeng Jia Hui Wang Tianyu Zong Chenyu Dai Jie Yuan Yuhao Li Dong Sun Ning Guo Yuqing Miao Shuang Zhou | 2021 | Bioactive Materials2021，6，2： | 5 |
| 3 | Circular RNAs in pulmonary hypertension:Emerging biological concepts and potential mechanism显示文摘Circular RNAs(circRNAs)are endogenous RNAs with a covalently closed single-stranded transcript.They are a novel class of genomic regulators that are linked to many important development and disease processes and are being pursued as clinical and therapeutic targets.Using the most powerful RNA sequencing and bioinformatics techniques,a large number of circRNAs have been identified and further functional studies have been performed.It is known that circRNAs act as potential biomarkers,sponges for microRNAs(miRNAs)and RNA-binding proteins(RBPs),and regulators of mRNA transcription.They also participate in the translation of peptides or proteins.Many types of circRNAs are dysregulated in plasma or lung tissues,and they may be involved in regulating the proliferation and apoptosis of pulmonary artery endothelial cells(PAECs)and pulmonary artery smooth muscle cells(PASMCs),leading to pulmonary vascular remodeling in pulmonary hypertension(PH).One possible mechanism is that circRNAs can regulate the function of PAECs and PASMCs by acting as miRNA sponge.However,other potential mechanisms of action of circRNAs are still being actively explored in PH.This paper presents a systematic review of the biogenesis,biological characterization,relevant underlying functions,and future perspectives for studies of circRNAs in the pathogenesis of PH. | Qian Wang Yuanyuan Sun Qinhua Zhao Wenhui Wu Lan Wang Yuqing Miao Ping Yuan | 2022 | Animal Models and Experimental Medicine2022，5，1： | 3 |
| 4 | ROS-responsive capsules engineered from EGCG-Zinc networks improve therapeutic angiogenesis in mouse limb ischemia显示文摘The successful treatment of limb ischemia requires that promote angiogenesis along with microenvironment improvement.Zinc ions have been reported to stimulate angiogenesis,but application was limited to the toxicity concerns.We hypothesized that zinc based metal-EGCG capsule(EGCG/Zn Ps)can achieve sustained release Zn2+resulting in reduced toxicity and improve angiogenesis as well as the improvement of microenvironment by ROS scavenging of EGCG.The surface morphology,zeta potential,infrared absorbance peaks and zinc ion release profile of the EGCG/Zn Ps were measured.In vitro,EGCG/Zn showed significantly antioxidant,antiinflammatory and induced cell migration effect.In addition,EGCG/Zn Ps enabled the sustained release of zinc ions,which reduced cytotoxicity and enhanced the secretion of vascular endothelial growth factor(VEGF)in vitro and in vivo.In mouse models of limb ischemia,EGCG/Zn Ps promoted angiogenesis and cell proliferation in ischemic tissues.Moreover,EGCG/Zn Ps group exhibited the most significant recovery of limb ischemic score,limb temperature and blood flow than other groups.In conclusion,EGCG/Zn Ps is a safe and promising approach to combine the merit of Zn2+and EGCG,thus enabling the direct application to limb ischemia. | Zuoguan Chen Jianwei Duan Yongpeng Diao Youlu Chen Xiaoyu Liang Huiyang Li Yuqing Miao Qing Gao Liang Gui Xiaoli Wang Jing Yang Yongjun Li | 2021 | Bioactive Materials2021，6，1： | 3 |
| 5 | Characteristics of oral methicillin-resistant Staphylococcus epidermidis isolated from dental plaque显示文摘The oral microbial community is widely regarded as a latent reservoir of antibiotic resistance genes. This study assessed the molecular epidemiology, susceptibility profile, and resistance mechanisms of 35 methicillin-resistant Staphylococcus epidermidis(MRSE) strains isolated from the dental plaque of a healthy human population. Broth microdilution minimum inhibitory concentrations(MICs) revealed that all the isolates were nonsusceptible to oxacillin and penicillin G. Most of them were also resistant to trimethoprim(65.7%) and erythromycin(54.3%). The resistance to multiple antibiotics was found to be largely due to the acquisition of plasmid-borne genes. The mec A and dfr A genes were found in all the isolates, mostly dfr G(80%), aac A-aph D(20%), aad D(28.6%), aph A3(22.9%), msr A(5.7%), and the erm C gene(14.3%). Classical mutational mechanisms found in these isolates were mainly efflux pumps such as qac A(31.4%), qac C(25.7%), tet K(17.1%), and nor A(8.6%). Multilocus sequence type analysis revealed that sequence type 59(ST59) strains comprised 71.43% of the typed isolates, and the e BURST algorithm clustered STs into the clonal complex 2-II(CC2-II). The staphyloccoccal cassette chromosome mec(SCCmec) type results showed that 25(71.43%) were assigned to type IV. Moreover, 88.66% of the isolates were found to harbor six or more biofilm-associated genes. The aap, atl E, embp, sdr F, and IS256 genes were detected in all 35 isolates. This research demonstrates that biofilm-positive multipleantibiotic-resistant ST59-SCCmec IV S. epidermidis strains exist in the dental plaque of healthy people and may be a potential risk for the transmission of antibiotic resistance. | Boyu Tang Tao Gong Yujia Cui Lingyun Wang Chao He Miao Lu Jiamin Chen Meiling Jing Anqi Zhang Yuqing Li | 2020 | International Journal of Oral Science2020，12，2： | 2 |
| 6 | Photoreceptive reaction spectrum effect and phototactic activity intensity of locusts’ visual display characteristics stimulated by spectral light显示文摘To reveal the nature of locusts’visual reaction when stimulated by light,and to clarify the regulation characteristics of locusts’phototactic visual physiology and obtain good spectral light features for locusts’phototactic action,this study investigated locusts’visual spectrum response by characterizing their photoreceptive reaction to LED light using an AvaSpec fiber-optic spectrometer system.Locusts’phototactic response to spectral light was compared using this system.The results showed that locusts’visual reaction characterization presents a photo-induced vision spectrum effect and that by offsetting the main wavelength of light and the spectral peak intensity,a time-varying bio-regulation effect emerges.In addition,locusts’visual regulation ability to UV light is higher than that to violet light,whereas their reaction intensity is lower than to violet light,and the visual bio-regulatory force of locusts’visual system absorbing orange light to react sensitively becomes gradually higher than when absorbing green light as time goes on.Moreover,corresponding to nominal illumination with the same radiant energy and a visual spectrum response stimulated by UV,violet,orange,and green light,it appears that the visual spectrum window is symmetrical around 382 nm,400 nm,602 nm,and 530 nm,respectively,with no significant difference between spectral amplitudes and having a time-varying incremental characteristic with amplitude peak width.This indicates that the stimulus intensity of UV,violet,orange,and green light exceeds locusts’visual tolerance,causing them to generate regulation inactivation as a visual physiological reaction,whereas the visual window response effect stimulated by UV light presents an illumination timeliness effect.Simultaneously,time-varying characteristics of locusts’bio-behavior intensity show that light intensity can make up for locusts’visual sensitivity differences at various spectral wavelengths.Presented with differential response time,photosensitive behavior intensity,and induction effect induced by orange light,time is superior for orange light,the stimulation effect caused by violet light is the strongest,and the phototactic synergy effect caused by UV light is the best. | Qihang Liu Yueli Jiang Jin Miao Zhongjun Gong Tong Li Yun Duan Yuqing Wu | 2021 | International Journal of Agricultural and Biological Engineering2021，14，2： | 2 |
| 7 | 显示文摘 | Sheng Linfeng Ren Jiangtao Miao Yuqing | 2011 | Biosens Bioelectron2011，26，8： | 1 |
| 8 | Enhanced electromagnetic characteristics of carbon nanotubes/carbonyl iron powders complex absorbers in 2–18<ce:hsp sp='0.25'/>GHz ranges显示文摘 | Guoxiu Tong Wenhua Wu Qiao Hua Yuqing Miao Jianguo Guan Haisheng Qian | 2010 | Journal of Alloys and Compounds2010，，2： | 1 |
| 9 | The role of prolactin/vasoinhibins in cardiovascular diseases显示文摘Prolactin(PRL)is a polypeptide hormone that is mainly synthesized and secreted by the lactotroph cells of the pituitary.There are two main isoforms of PRL:23-kDa PRL(named full-l ength PRL)and vasoinhibins(including 5.6–18 kDa fragments).Both act as circulating hormones and cytokines to stimulate or inhibit vascular formation at different stages and neovascularization,including endothelial cell proliferation and migration,protease production,and apoptosis.However,their effects on vascular function and cardiovascular diseases are different or even contrary.In addition to the structure,secretion regulation,and signal transduction of PRL/vasoinhibins,this review focuses on the pathological mechanism and clinical significance of PRL/vasoinhibins in cardiovascular diseases. | Hui Zhao Sugang Gong Yongcong Shi Cijun Luo Hongling Qiu Jing He Yuanyuan Sun Yuxia Huang Shang Wang Yuqing Miao Wenhui Wu | 2023 | Animal Models and Experimental Medicine2023，6，2： | 1 |
| 10 | Influences of yellow and green lights on the visual response of western flower thrips and field verification显示文摘This study aimed to determine the effects of spectral light characteristics on the visual response of the western flower thrips,the strengthening mechanism of thrips response behavior regulated by light,and thrips response characteristics to contrast light.Light with combined and single wavelength were tested by using a self-made behavior response device for thrips.Light sources for trapping thrips were made to verify the trapping effect on thrips in a greenhouse,and the reasons for changes in thrips behavior were analyzed to characterize the mechanism of their phototactic response.The results showed that the light mode(single,contrast,combined light)affected the thrips visual response and approach response,whereas in contrast light,the effects were optimal.Combination light inhibited the thrips visual response,and when the illumination increased,the thrips visual response to single and combination light intensified,and the thrips approach sensitivity to green light increased in contrast and combination light.However,the light mode did not affect the thrips visual response and sensitivity to spectral light characteristics.The degree of thrips visual response to yellow light was stronger than that to green light,while the degree of thrips visual response to green light was stronger than that to yellow light,indicating that the photo-induced mechanism of the thrips visual response differed from that of the thrips approach response.Moreover,in the greenhouse,the trapping effect of different light sources on thrips was positively correlated with temperature.The trapping effect of green light was optimal,followed by a yellow light source,while the difference of light intensity(illumination,illumination energy)and its photo-thermal intensity between yellow and green light was the reason for the differences in the degree of visual trends and the trapping effects of thrips.However,the sensitivity of thrips responding to different light depended on the difference in the heterogeneous stimulation intensity of different spectral light.Thus,light brightness and photo-thermal effects were the causes of thrips visual responses,while bio-photoelectric reaction effects caused thrips to produce a visual response and affected the degree of the thrips visual response.The results reveal the underlying causes of pest control by light,and provide a theoretical basis for the research and development of pest induction equipment and light arrangements. | Qihang Liu Mingqian Zhao Jin Miao Guangchun Fu Yuqing Wu | 2022 | International Journal of Agricultural and Biological Engineering2022，15，4： | 1 |
| 11 | Synthesis of pure Ti()2 mesoporous molecular sieves and their photocatalytic antivity显示文摘 | DAI Qing LI Ping MIAO Yuqing | 1998 | Chinese J Catalysis1998，19，6： | 1 |
| 12 | New technology for the detection of pH显示文摘 | Miao Yuqing Chen Jianrong Fang Keming | 2005 | Journal of Biochemical and Biophysical Methods2005，，1： | 1 |
| 13 | Visual response effects of western flower thrips manipulated by different light spectra显示文摘To understand how spectral light wavelength affects thrips visual sensitivity,the selective response and the approach sensitivity of western flower thrips were examined.The results showed that light intensity affected thrips selective sensitivity to different spectra,with good visual sensitivity to blue,ultraviolet(UV),and green light changes to UV,violet,and yellow light when illumination increased from 120 lx to 6000 lx.Red light was the sensitive spectral light driving thrips to respond to sensitive light.Under illumination,the best sensitivity response to spectra was violet,while under light energy,this changed to UV when light energy was increased to 120 mW/cm^(2).However,the photo-stimulus properties(illumination or light energy)did not affect the optimal approach sensitivity to UV light.Furthermore,when illumination or light energy stimulated thrips to select two different spectral lights,the total response sensitivity to 12000 lx of UV and violet light were the best(83.27%),while at 60 mW/cm^(2) of UV and yellow light was the best(82.15%).But different photo-stimulus properties influenced on the total approach sensitivity to the stimulation of two different spectral lights when the intensity of light increased,showing that to 12000 lx of violet and green light was the best(53.18%),while for 120 mW/cm^(2) of UV and green light was the best(47.74%).The thrips visual selection response effects stimulated by illumination were different from that induced by light energy,and originated from the thrips different bio-regulatory effects caused by the intensity of light energy of illumination and the intensity of illumination of light energy.Therefore,different photo-stimulus effects can manipulate thrips visual sensitivity to enhance the phototactic effect. | Qihang Liu Yueli Jiang Jin Miao Zhongjun Gong Tong Li Yun Duan Yuqing Wu | 2019 | International Journal of Agricultural and Biological Engineering2019，12，5： | 1 |
| 14 | Nanotechnology and biosensors显示文摘 | Chen Jianrong Miao Yuqing He Nongyue Wu Xiaohua Li Sijiao | 2004 | Biotechnology Advances2004，，7： | 1 |
| 15 | Synthesis of pure TiO2 mesoporous molecular sieves and their photocatalytic activity显示文摘 | Dai Qing Li Ping Miao Yuqing | 1998 | Chinese Journal of Catalysis1998，19，6： | 1 |
| 16 | Mild hyperthermia synergized chemotherapy by Bi_(2)Se_(3)/MoSe_(2)nanosaucers for cancer treatment with negligible thermal resistance显示文摘Harsh photothermal temperatures(>50℃)caused heating damage to the normal tissues and induced thermal resistance in cancer cells,which significantly limited the safety and efficacy of photothermal therapy(PTT)in cancer treatment.Mild hyperthermia(<42℃)combined with chemotherapy might solve this issue.Herein,a novel transition metal dichalcogenides nanostructure,namely,Bi_(2)Se_(3)/MoSe_(2)nanosaucers(BMNSs),was designed to produce mild photo-hyperthermia(mPTT)and combined with chemotherapy to improve the overall antitumor efficacy.The BMNSs were constituted by Bi_(2)Se_(3)hexagonal nanoplates and enclosed with MoSe_(2)nanosheets evenly.While the MoSe_(2)moiety endowed the nanoplatform with excellent photothermal efficacy,the Bi_(2)Se_(3)substrates provided large specific surface area to anchor more doxorubicin(DOX)molecules as chemotherapeutic agent.Under the stimuli of mPTT/tumor acidic microenvironment,the tumor-specific drug release and the enhanced chemotherapy could be realized,showing impressive therapeutic outcomes against 4T1 cells.The synergetic therapeutic mechanism might be attributed to the mPTT induced cell membrane permeability,and interestingly,the expression of heat shock proteins 70 was not elevated obviously after the synergetic therapy,thus to avoid the tumor thermal resistance and further improve the therapeutic effect.The in vivo anti-tumoral performance of the BMNSs was further studied and complete tumor eradication was achieved without any recurrence and biotoxicity.Not only demonstrating a paradigm of high therapeutic efficacy of mild hyperthermia and synergistic chemotherapy for precise cancer therapy,our findings proved that the cancer therapeutic effect can be improved with minimal side effects through exquisite designing of the microstructures and the physiochemical properties of the nanoplatform. | Fei Gao Tingbin Zhang Yuqing Miao Huijun Ma Hui Guo Ruyi Jin Zhi Li Haifang Wang Haiming Fan Lingyun Zhao | 2022 | Nano Research2022，15，9： | 1 |
| 17 | Self-assembly of Bi III ultrathin layer on Pt surface for non-enzymatic glucose sensing显示文摘 | Yuqing Miao Zhuoyuan Yang Xiaoyan Liu Lina Xu Lei Ouyang Yingying Gu Haizhou Chang Ruizhuo Ouyang | 2013 | Electrochimica Acta2013，，： | 1 |
| 18 | Sub-lethal effects of four neonicotinoid seed treatments on the demography and feeding behaviour of the wheat aphid Sitobion avenae 显示文摘 | MIAO Jin DU Zhenbao WU Yuqing | 2014 | Pest Manag Sci2014，70，1： | 1 |
| 19 | Preparation and characterization of pepsin-solubilized type I collagen from the scales of snakehead(Ophioce phalus argus)显示文摘 | Liu Wentao Li Guoying Miao Yuqing | 2009 | J Food Biochem2009，33，1： | 1 |
| 20 | Improving estimation of summer maize nitrogen status with red edge-based spectral vegetation indices显示文摘 | Fei Li Yuxin Miao Guohui Feng Fei Yuan Shanchao Yue Xiaowei Gao Yuqing Liu Bin Liu Susan L. Ustin Xinping Chen | 2013 | Field Crops Research2013，，： | 1 |
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