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| 1 | Dynamic tubulation of mitochondria drives mitochondrial network formation显示文摘 | Chong Wang Wanqing Du Qian Peter Su Mingli Zhu Peiyuan Feng Ying Li Yichen Zhou Na Mi Yueyao Zhu Dong Jiang Senyan Zhang Zerui Zhang Yujie Sun Li Yu | 2015 | Cell Research2015，25，10： | 8 |
| 2 | Predictive factors associated with gefitinib response in patients with advanced non-small-cell lung cancer(NSCLC)显示文摘Purpose: A number of different clinical characteristics have been reported to singly correlate with therapeutic activity of epidermal growth factor receptor(EGFR) tyrosine kinase inhibitors(TKIs) in advanced non-small-cell lung cancer(NSCLC). This study aimed to identify predictive factors associated with prognostic benefits of gefitinib.Patients and methods: EGFR gene typing in 33 advanced NSCLC patients received gefitinib(250 mg/day) were analyzed with mutant-enriched PCR assay. Gefitinib response was evaluated with potential predictive factors retrospectively.Results: The overall objective response rate(ORR) and median progression-free survival(PFS) in the 33 patients treated by gefitinib were 45.5% and 3.0(2.0-4.0) months. The ORR and median PFS in EGFR gene mutation patients were significantly higher/longer than those in EGFR gene wild-type patients(P<0.01). Similarly, the ORR and median PFS in non-smoker patients were significantly higher/longer than those in smoker patients(P<0.05, P<0.01, respectively). However, no difference for ORR and median PFS occurred between male and female patients. Logistic multivariate analysis showed that only EGFR mutated gene was significantly associated with the ORR(P<0.01). Both EGFR mutated gene and non-smoker were the major factors that contributed to PFS(P<0.05). Conclusions: EGFR mutated gene and non-smoker status are potential predictors for gefitinib response in NSCLC patients. | Lian Chen Rui Chen Zhe Zhu Yichen Zhang Zhengwei Wen Yun Li Xiaoming Li Yuwen Luo Liyu Ma Shuguang Lin Xin Chen | 2014 | Chinese Journal of Cancer Research2014，26，4： | 7 |
| 3 | Subvoxel light-sheet microscopy for high-resolution high-throughput volumetric imaging of large biomedical specimens显示文摘A key challenge when imaging whole biomedical specimens is how to quickly obtain massive cellular information over a large field of view(FOV).We report a subvoxel light-sheet microscopy(SLSM)method enabling high-throughput volumetric imaging of mesoscale specimens at cellular resolution.A nonaxial,continuous scanning strategy is developed to rapidly acquire a stack of large-FOV images with three-dimensional(3-D)nanoscale shifts encoded.Then,by adopting a subvoxel-resolving procedure,the SLSM method models these low-resolution,cross-correlated images in the spatial domain and can iteratively recover a 3-D image with improved resolution throughout the sample.This technique can surpass the optical limit of a conventional light-sheet microscope by more than three times,with high acquisition speeds of gigavoxels per minute.By fast reconstruction of 3-D cultured cells,intact organs,and live embryos,SLSM method presents a convenient way to circumvent the trade-off between mapping large-scale tissue(>100 mm3)and observing single cell(∼1-μm resolution).It also eliminates the need of complicated mechanical stitching or modulated illumination,using a simple light-sheet setup and fast graphics processing unit-based computation to achieve high-throughput,high-resolution 3-D microscopy,which could be tailored for a wide range of biomedical applications in pathology,histology,neuroscience,etc. | Peng Fei Jun Nie Juhyun Lee Yichen Ding Shuoran Li Hao Zhang Masaya Hagiwara Tingting Yu Tatiana Segura Chih-Ming Ho Dan Zhu Tzung KHsiaic | 2019 | Advanced Photonics2019，1，1： | 6 |
| 4 | The Msi1-mTOR pathway drives the pathogenesis of mammary and extramammary Paget’s disease显示文摘Mammary and extramammary Paget’s Diseases(PD)are a malignant skin cancer characterized by the appearance of Paget cells.Although easily diagnosed,its pathogenesis remains unknown.Here,single-cell RNA-sequencing identified distinct cellular states,novel biomarkers,and signaling pathways—including mTOR,associated with extramammary PD.Interestingly,we identified MSI1 ectopic overexpression in basal epithelial cells of human PD skin,and show that Msi1 overexpression in the epidermal basal layer of mice phenocopies human PD at histopathological,single-cell and molecular levels.Using this mouse model,we identified novel biomarkers of Paget-like cells that translated to human Paget cells.Furthermore,single-cell trajectory,RNA velocity and lineage-tracing analyses revealed a putative keratinocyte-to-Paget-like cell conversion,supporting the in situ transformation theory of disease pathogenesis.Mechanistically,the Msi1-mTOR pathway drives keratinocyte-Paget-like cell conversion,and suppression of mTOR signaling with Rapamycin significantly rescued the Paget-like phenotype in Msi1-overexpressing transgenic mice.Topical Rapamycin treatment improved extramammary PD-associated symptoms in humans,suggesting mTOR inhibition as a novel therapeutic treatment in PD. | Yongli Song Christian F.Guerrero-Juarez Zhongjian Chen Yichen Tang Xianghui Ma Cong Lv Xueyun Bi Min Deng Lina Bu Yuhua Tian Ruiqi Liu Ran Zhao Jiuzhi Xu Xiaole Sheng Sujuan Du Yeqiang Liu Yunlu Zhu Shi-jun Shan Hong-duo Chen Yiqiang Zhao Guangbiao Zhou Jianwei Shuai Fazheng Ren Lixiang Xue Zhaoxia Ying Xing Dai Christopher J.Lengner Bogi Andersen Maksim V.Plikus Qing Nie Zhengquan Yu-Show | 2020 | Cell Research2020，30，10： | 2 |
| 5 | Strong partitioning of soil bacterial community composition and co-occurrence networks along a small-scale elevational gradient on Zijin Mountain显示文摘The elevational distributions of bacterial communities in natural mountain forests,especially along large elevational gradients,have been studied for many years.However,the distributional patterns that underlie variations in soil bacterial communities along small-scale elevational gradients in urban ecosystems are not yet well understood.Using Illumina MiSeq DNA sequencing,we surveyed soil bacterial communities at three elevations on Zijin Mountain in Nanjing City:the hilltop(300 m a.s.l.),the hillside(150 m a.s.l.),and the foot of the hill(0 m a.s.l.).The results showed that edaphic properties differed significantly with elevation.Bacterial community composition,rather than alpha diversity,strongly differed among the three elevations(Adonis:R2=0.12,P<0.01).Adonis and DistLM analyses demonstrated that bacterial community composition was highly correlated with soil pH,elevation,total nitrogen(TN),and dissolved organic carbon(DOC).The degree scores,betweenness centralities,and composition of keystone species were distinct among the elevations.These results demonstrate strong elevational partitioning in the distributions of soil bacterial communities along the gradient on Zijin Mountain.Soil pH and elevation together drove the smallscale elevational distribution of soil bacterial communities.This study broadens our understanding of distribution patterns and biotic co-occurrence associations of soil bacterial communities from large elevational gradients to short elevational gradients. | Xu Liu Teng Yang Yu Shi Yichen Zhu Mulin He Yunke Zhao Jonathan MAdams Haiyan Chu | 2021 | Soil Ecology Letters2021，3，4： | 2 |
| 6 | Geodesic saliency using background priors 显示文摘 | Wei Yichen Wen Fang Zhu Wangjiang | 2012 | Lecture Notes in Computer Science2012，7574，： | 1 |
| 7 | Immunomodulating Activities of Polysaccharides from ZhuQin Formula and Atractylodes in Hypoimmune Mice显示文摘[Objectives] To investigate the infrared identification of ZhuQin Formula and Atractylodes polysaccharides and its effect on immune function in immunocompromised mice. [Methods] In this experiment,the structure of polysaccharides was analyzed by Fourier transform infrared spectroscopy. The experiment was divided into the polysaccharide groups of high,medium and low dose of ZhuQin,the extraction group of ZhuQin,the polysaccharide group of Atractylodes,the positive drug group,the blank group and the model group. The model of immunosuppressed mice was established by intraperitoneal injection of cyclophosphamide. The carbon clearance index,immune organ index,serum hemolysin,spleen T and B lymphocyte transformation rate were determined. [Results]The results show that the polysaccharides have obvious absorption peaks of polysaccharides; Formula extracts and polysaccharides can enhance the immune function of immunosuppressive mice at a certain dose level,and the effect of formula polysaccharide is better than that of extract and single traditional Chinese medicine polysaccharides. [Conclusions] The results suggest that the polysaccharides of ZhuQin Formula and Atractylodes may be acidic polysaccharides containing pyran ring and furan ring. ZhuQin Formula polysaccharide may play an immunomodulatory role mainly by improving the specific immunity of the organism. | Min PANG Yichen LUO Yongfeng HAO Xin YUE Zhaorong ZHU Juan LIU | 2018 | Medicinal Plant2018，9，1： | 1 |
| 8 | Energy consumption and economic growth in China: A multivariate causality test显示文摘 | Yuan Wang Yichen Wang Jing Zhou Xiaodong Zhu Genfa Lu | 2011 | Energy Policy2011，，39： | 1 |
| 9 | Survey on Reinforcement Learning Applications in Communication Networks显示文摘In recent years,intelligent communication has drawn huge research efforts in both academia and industry.With the advent of 5G technology,intelligent wireless terminals and intelligent communication networks are increasingly under intensive study.Artificial intelligence enhances the network capability with automatic and adaptive adjustment.Reinforcement learning(RL)and deep reinforcement learning(DRL)are two powerful techniques in artificial intelligence which can learn the optimal decision according to the environment feedback.In this paper,we focus on the latest research progress on RL and DRL applied in three emerging technologies including mobile edge computing(MEC),software defined network(SDN)and network virtualization in 5G.The prospect of further research and development in the future is preliminarily forecasted. | Yichen Qian Jun Wu Rui Wang Fusheng Zhu Wei Zhang | 2019 | Journal of Communications and Information Networks2019，4，2： | 1 |
| 10 | Photonic integrated neuro-synaptic core for convolutional spiking neural network显示文摘Neuromorphic photonic computing has emerged as a competitive computing paradigm to overcome the bottlenecks of the von-Neumann architecture.Linear weighting and nonlinear spike activation are two fundamental functions of a photonic spiking neural network(PSNN).However,they are separately implemented with different photonic materials and devices,hindering the large-scale integration of PSNN.Here,we propose,fabricate and experimentally demonstrate a photonic neuro-synaptic chip enabling the simultaneous implementation of linear weighting and nonlinear spike activation based on a distributed feedback(DFB)laser with a saturable absorber(DFB-SA).A prototypical system is experimentally constructed to demonstrate the parallel weighted function and nonlinear spike activation.Furthermore,a fourchannel DFB-SA laser array is fabricated for realizing matrix convolution of a spiking convolutional neural network,achieving a recognition accuracy of 87%for the MNIST dataset.The fabricated neuro-synaptic chip offers a fundamental building block to construct the large-scale integrated PSNN chip. | Shuiying Xiang Yuechun Shi Yahui Zhang Xingxing Guo Ling Zheng Yanan Han Yuna Zhang Ziwei Song Dianzhuang Zheng Tao Zhang Hailing Wang Xiaojun Zhu Xiangfei Chen Min Qiu Yichen Shen Wanhua Zheng Yue Hao | 2023 | Opto-Electronic Advances2023，6，11： | 1 |
| 11 | Effect of leading-edge tubercles on the flow over low-aspect-ratio wings at low Reynolds number显示文摘Two-dimensional time-resolved particle image velocimetry(TR-PIV)and stereographic particle image velocimetry(SPIV)techniques were used to investigate the effect of leading-edge tubercles on the flow over low-aspect-ratio wing models.The angle of attack is fixed at 10°,and the Reynolds number based on chord length is 5.8×10^(3).It is shown that the leading-edge tubercles can effectively mitigate flow separation in the model and also reduce the contribution of wake vortex to the fluctuating energy of flow.Counter-rotating vortex pairs(CVPs)initiated from the peak of leading-edge tubercles can promote nearby momentum exchange,enhance mixing of the flow and increase the energy contained in the boundary layer,which results in resisting the larger adverse pressure gradient.Therefore,it is concluded that CVPs play an important role in mitigating the flow separation for wings with leading-edge tubercles. | Pengxin Yang Yichen Zhu Jinjun Wang | 2023 | Theoretical & Applied Mechanics Letters2023，13，1： | 0 |
| 12 | Self-assembled Supramolecular Artificial Transmembrane Ion Channels:Recent Progress and Application显示文摘Natural protein channels have evolved with fantastic spatial structures,which play pivotal physiological functions in all living systems.Learning from nature,chemical scientists have developed a myriad of artificial transmembrane ion channels by using various chemical strategies,among which the non-covalent supramolecular ion channels exhibit remarkable advantages over other forms(e.g.,single-molecule ion channel),which exhibited facile preparation methods,easier structural modification and functionalization.In this review,we have systematically summarized the recent progress of supramolecular self-assembled artificial transmembrane ion channels,which were classified by different self-assembly mechanisms,such as hydrogen bonds,π-πinteractions,etc.Detailed preparation process and self-assembly strategies of the supramolecular ion channels have been described.Moreover,potential biomedical applications of the supramolecular ion channels have also been carefully discussed in this review.Finally,future opportunities and challenges facing this field were also elaborately discussed.It is anticipated that this review could provide a panoramic sketch and future directions towards the construction of novel artificial ion channels with novel functions and biomedical applications. | LUO Yichen ZHU Canhong ZHANG Tianlong YAN Tengfei LIU Junqiu | 2023 | Chemical Research in Chinese Universities2023，39，1： | 0 |
| 13 | Rank Badges of Official Costumes ofMing and Qing Dynasties from the Perspective of Social Semiotics显示文摘The official dress systems of Ming and Qing Dynasties were formulated by the rulers of those feudal societies to maintain their ruling status.As well as being a functional indication of the type and power of officials,the rank badge,Buzi or Bufu(补子,补服),on official clothes indirectly declared the elegant and brave characteristics of civil and military officers,and also reflected the philosophy of the unity and harmony between human and nature.Informed by social semiotics theory,the Buzi patterns embody the culture and arts of ancient Chinese clothing,producing novel meaning within corresponding social contexts,which can be inherited and developed in today's society.Moreover,the wearing of official unified clothes and rank badges by officials and civil servants should be encouraged since those persons often serve as a role model and are subject to public's scrutiny.Thus ancient Chinese culture and arts can flourish,a good social order and law be maintained,and a harmonious and civilized society built. | Yichen Zhu | 2021 | Language and Semiotic Studies2021，7，2： | 0 |
| 14 | 对比分析黑斑息肉综合征合并大肠癌组织肿瘤相关基因(英文)显示文摘Objective:The aim of the study was to screen the differentially expressed genes of Peutz-Jeghers syndrome (PJS) and colorectal carcinoma (CRC).Methods:This study used cDNA microarray to comparatively analyze the gene expression profiles of 4 cases of PJS combined with colorectal adenocarcinoma vs.normal mucosae.The cDNA microarray contained 8064 human genes,and then using RT-PCR to test three genes of all.Results:The experimental data showed that fourteen genes were differentially expressed,which were up-regulated in PJS.Fifty-one genes expressions were altered in CRCs,of which 32 were up-regulated,as compared to the normal mucosae.In addition,5 genes were similarly altered in both PJS and CRCs.RT-PCR analyses confirmed the cDNA microarray data for three of those genes:LATS2,APC and MADH4.Conclusion:LCN2,USP4,GRO3,HYAL1 and APC-these differentially expressed genes likely represent biomarkers for early detection of CRC and may be potential therapeutic targets. | Xiaosan Zhu Yichen Dai Qingzhen Nan Zhangxin Chen Junpei Xie Wei Zeng Yuka Fu Yuanyuan Lin Qingna Lian Qiaofang Sang Xiaojuan Zhan | 2011 | The Chinese-German Journal of Clinical Oncology2011，10，8： | 0 |
| 15 | MomL inhibits bacterial antibiotic resistance through the starvation stringent response pathway显示文摘Antibiotic resistance in gram-negative pathogens has become one of the most serious global public health threats.The role of the N-acyl homoserine lactone(AHL)-mediated signaling pathway,which is widespread in gram-negative bacteria,in the bacterial resistance process should be studied in depth.Here,we report a degrading enzyme of AHLs,MomL,that inhibits the antibiotic resistance of Pseudomonas aeruginosa through a novel mechanism.The MomL-mediated reactivation of kanamycin is highly associated with the relA-mediated starvation stringent response.The degradation of AHLs by MomL results in the inability of LasR to activate relA,which,in turn,stops the activation of downstream rpoS.Further results show that rpoS directly regulates the type VI secretion system H2-T6SS.Under MomL treatment,inactivated RpoS fails to regulate H2-T6SS;therefore,the expression of effector phospholipase A is reduced,and the adaptability of bacteria to antibiotics is weakened.MomL in combination with kanamycin is effective against a wide range of gram-negative pathogenic bacteria.Therefore,this study reports a MomL-antibiotic treatment strategy on antibiotic-resistant bacteria and reveals its mechanism of action. | Qin Dou Jin Yuan Rilei Yu Jiahui Yang Jiayi Wang Yuxiang Zhu Jing Zhong Hongan Long Zhiqing Liu Xianghong Wang Yuying Li Yichen Xiao Jiazhen Liang Xiao-Hua Zhang Yan Wang | 2022 | mLife2022，1，4： | 0 |
| 16 | Experimental observation of multiple topological nodal structure in LaSb_(2)显示文摘Unconventional fermions in the immensely studied topological semimetals are the source for rich exotic topological properties.Here,using symmetry analysis and first-principles calculations,we propose the coexistence of multiple topological nodal structure in LaSb_(2),including topological nodal surfaces,nodal lines and in particular eightfold degenerate nodal points,which have been scarcely observed in a single material.Further,utilizing angle-resolved photoemission spectroscopy,we confirm the existence of nodal surfaces and eightfold degenerate nodal points in LaSb_(2).The intriguing multiple topological nodal structure might play a crucial role in giving rise to the large linear magnetoresistance.Our work renews the insights into the exotic topological phenomena in LaSb_(2). | Yuxi Qiao Fuyi Wang Huaiqiang Wang Zicheng Tao Zhicheng Jiang Zhengtai Liu Soohyun Cho Fayuan Zhang Qingkai Meng Wei Xia Yichen Yang Zhe Huang Jishan Liu Zhonghao Liu Zengwei Zhu Shan Qiao Yanfeng Guo Haijun Zhang Dawei Shen | 2024 | Science China(Physics,Mechanics & Astronomy)2024，67，4： | 0 |
| 17 | Ancient DNA reveals the maternal genetic history of East Asian domestic pigs显示文摘Zoo-archaeological and genetic evidence suggest that pigs were domesticated independently in Central China and Eastern Anatolia along with the development of agricultural communities and civilizations.However,the genetic history of domestic pigs,especially in China,has not been fully explored.In this study,we generate 42 complete mitochondrial DNA sequences from~7500-to 2750-year-old individuals from the Yellow River basin.Our results show that the maternal genetic continuity of East Asian domestic pigs dates back to at least the Early to Middle Neolithic.In contrast,the Near Eastern ancestry in European domestic pigs saw a near-complete genomic replacement by the European wild boar.The majority of East Asian domestic pigs share close haplotypes,and the most recent common ancestor of most branches dates back to less than 20,000 years before present,inferred using new substitution rates of whole mitogenomes or combined protein-coding regions.Two major population expansion events of East Asian domestic pigs coincided with changes in climate,widespread adoption of introduced crops,and the development of agrarian societies.These findings add to our understanding of the maternal genetic composition and help to complete the picture of domestic pig evolutionary history in East Asia. | Ming Zhang Yichen Liu Zhipeng Li Peng Lü Jacob D.Gardner Maolin Ye Jihuai Wang Miaomiao Yang Jing Shao Weilin Wang Qingyan Dai Peng Cao Ruowei Yang Feng Liu Xiaotian Feng Lizhao Zhang Enwei Li Yunzheng Shi Zehui Chen Shilun Zhu Weiwei Zhai Tao Deng Ziyuan Duan E.Andrew Bennett Songmei Hu Qiaomei Fu | 2022 | Journal of Genetics and Genomics2022，49，6： | 0 |
| 18 | Circular RNA expression and the competitive endogenous RNA network in pathological,age-related macular degeneration events:A cross-platform normalization study显示文摘Age-related macular degeneration(AMD)causes irreversible blindness in people aged over 50 worldwide.The dysfunction of the retinal pigment epithelium is the primary cause of atrophic AMD.In the current study,we used the ComBat and Training Distribution Matching method to integrate data obtained from the Gene Expression Omnibus database.We analyzed the integrated sequencing data by the Gene Set Enrichment Analysis.Peroxisome and tumor necrosis factor-α(TNF-α)signaling and nuclear factor kappa B(NF-κB)were among the top 10 pathways,and thus we selected them to construct AMD cell models to identify differentially expressed circular RNAs(circRNAs).We then constructed a competing endogenous RNA network,which is related to differentially expressed circRNAs.This network included seven circRNAs,15 microRNAs,and 82 mRNAs.The Kyoto Encyclopedia of Genes and Genomes analysis of mRNAs in this network showed that the hypoxia-inducible factor-1(HIF-1)signaling pathway was a common downstream event.The results of the current study may provide insights into the pathological processes of atrophic AMD. | Ruxu Sun Hongjing Zhu Ying Wang Jianan Wang Chao Jiang Qiuchen Cao Yeran Zhang Yichen Zhang Songtao Yuan Qinghuai Liu | 2023 | The Journal of Biomedical Research2023，37，5： | 0 |
| 19 | Near-wall topological patterns and flow structures over a simplified Danaus plexippus model显示文摘Studies on the high-lift mechanisms of butterfly gliding flights shed light on the design of the micro air vehicles.The flow field around a simplified Danaus plexippus model is investigated using the hydrogen bubble visualization and the Particle Image Velocimetry(PIV)techniques.There are three near-wall topological patterns with different Angles of Attack(AoAs):the separation bubble,the Leading-Edge Vortex(LEV)and the high Ao As flow.For the separation bubble pattern,two saddles and two foci form in the middle of the model.The features of the LEV pattern are the leading-edge separation lines.The topological characteristics of the separation lines are changed by the interaction between the LEV and the Wing-Tip Vortex(WTV).For the high Ao As flow pattern,four unstable foci are found at the forewing and the hindwing respectively.The angle between the trajectory of the WTV and the model increases with increasing Ao A even though the slope of the WTV angle versus Ao A curve declines at the moderate AoAs. | Yichen ZHU Yuan QU Jinjun WANG Baofeng MA | 2020 | Chinese Journal of Aeronautics2020，33，10： | 0 |
| 20 | Comparative Analysis of the Evolution of Community Space in Chengdu-Chongqing Region: A Case Study of Main Urban Areas in Chengdu and Chongqing显示文摘Due to the integrated development between Chengdu and Chongqing,there are a large number of residents flowing into the two cities from their surrounding areas,so community renewal is imminent.Because of the similarity in the historical and cultural background of the two places,a comparative analysis of the evolution of community space in Chengdu-Chongqing Region enables Chengdu and Chongqing learn from each other and speed up the pace of renewal.This paper analyzed the evolution of community space in main urban areas of Chengdu and Chongqing.Specifically,the evolution of community space in Chengdu and Chongqing went through three stages.The starting time of community renewal in the two places was very close,but the duration of each stage varied.The second stage of Chengdu continued for a longer time,so its renovation and renewal of the community space was more detailed and thorough,and the emphasis and extension direction of the evolution of the community space were different.The evolution of community space in both Chengdu and Chongqing went through'mechanical renewal of demolition and construction—small-scale gradual renewal',but the path of renewal and development of the community space in Chengdu was faster.This paper,from the perspective of the evolution of community space,put forward the framework and content of community renewal in Chengdu and Chongqing based on community development and elaborated the community research content based on community development. | GAO Wei XIAO Yue HE Yi GUO Zhenni LENG Qinyi LIU Hong KANG Yichen WANG Zhiye ZHU Zeliang WANG Jiamin ZHOU Xu CHAO Yi DONG Hailong MAO Xiao WANG Chensu | 2017 | Journal of Landscape Research2017，9，5： | 0 |
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