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| 1 | A Chromosome-Scale Genome Assembly of Paper Mulberry(Bmussonetia papyrifera)Provides New Insights into Its Forage and Papermaking Usage显示文摘Paper mulberry(Broussonetia papyrifera)is a well-known woody tree historically used for Cai Lun papermaking,one of the four great inventions of ancient China.More recently,Paper mulberry has also been used as forage to address the shortage of feedstuff because of its digestible crude fiber and high protein contents.In this study,we obtained a chromosome-scale genome assembly for Paper mulberry using integrated approaches,including Illumina and PacBio sequencing platform as well as Hi-C,optical,and genetic maps.The assembled Paper mulberry genome consists of 386.83 Mb,which is close to the estimated size,and 99.25%(383.93 Mb)of the assembly was assigned to 13 pseudochromosomes.Comparative genomic analysis revealed the expansion and contraction in the flavonoid and lignin biosynthetic gene families,respectively,accounting for the enhanced flavonoid and decreased lignin biosynthesis in Paper mulberry.Moreover,the increased ratio of syringyl-lignin to guaiacyl-lignin in Paper mulberry underscores its suitability for use in medicine,forage,papermaking,and barkcloth making.We also identified the rootassociated microbiota of Paper mulberry and found that Pseudomonas and Rhizobia were enriched in its roots and may provide the source of nitrogen for its stems and leaves via symbiotic nitrogen fixation.Collectively,these results suggest that Paper mulberry might have undergone adaptive evolution and recruited nitrogen-fixing microbes to promote growth by enhancing flavonoid production and altering lignin monomer composition.Our study provides significant insights into genetic basis of the usefulness of Paper mulberry in papermaking and barkcloth making,and as forage.These insights will facilitate further domestication and selection as well as industrial utilization of Paper mulberry worldwide. | Xianjun Peng Hui Liu Peilin Chen Feng Tang Yanmin Hu Fenfen Wang Zhi Pi Meiling Zhao Naizhi Chen Hui Chen Xiaokang Zhang Xueqing Yan Min Liu Xiaojun Fu Guofeng Zhao Pu Yao Lili Wang He Dai Xuming Li Wei Xiong Wencai Xu Hongkun Zheng Haiyan Yu Shihua Shen | 2019 | Molecular Plant2019，12，5： | 18 |
| 2 | Near-field surface movement during the Wenchuan M_s8.0 earthquake measured by high-rate GPS显示文摘Based on high-rate (1 Hz) GPS data from the Sichuan GPS Continuous Observation Network on the footwall of the Longmenshan Fault, we have characterized the near-field surface movement process during the 5.12 Wenchuan Earthquake. Results show that the maximum deformation near the fault is larger than the deformation set. Stations on the northern segment of the fault moved towards the epicenter first, and then turned toward the vertical orientation of the fault. Deformation of stations on the southern segment is smaller and recovered. The initial motion at all of the stations was downward followed by periodic up and down movements. Comparing the displacement from high-rate GPS and accelerograph data, we can see that they are consistent prior to the arrival of the principal shock, but afterwards a 10 cm difference is found, even though they are synchronized and in phase. More work is yet to be done to explain this. This is the first time that actual the real near-field surface movements of an earth- quake of M >7.0 have been determined in china. These measurements are therefore of high value for studies of surface rupture processes and the analysis of seismic wave travels paths in this region. | YIN HaiTao ZHANG PeiZhen GAN WeiJun WANG Min LIAO Hua LI XiaoJun LI Jie XIAO GenRu | 2010 | Chinese Science Bulletin2010，55，23： | 11 |
| 3 | Clinical features and the traditional Chinese medicine therapeutic characteristics of 293 COVID-19 inpatient cases显示文摘Coronavirus disease 2019 (COVID-19) is now pandemic worldwide and has heavily overloaded hospitals in Wuhan City, China during the time between late January and February. We reported the clinical features and therapeutic characteristics of moderate COVID-19 cases in Wuhan that were treated via the integration of traditional Chinese medicine (TCM) and Western medicine. We collected electronic medical record (EMR) data, which included the full clinical profiles of patients, from a designated TCM hospital in Wuhan. The structured data of symptoms and drugs from admission notes were obtained through an information extraction process. Other key clinical entities were also confirmed and normalized to obtain information on the diagnosis, clinical treatments, laboratory tests, and outcomes of the patients. A total of 293 COVID-19 inpatient cases, including 207 moderate and 86 (29.3%) severe cases, were included in our research. Among these cases, 238 were discharged, 31 were transferred, and 24 (all severe cases) died in the hospital. Our COVID-19 cases involved elderly patients with advanced ages (57 years on average) and high comorbidity rates (61%). Our results reconfirmed several well-recognized risk factors, such as age, gender (male), and comorbidities, as well as provided novel laboratory indications (e.g., cholesterol) and TCM-specific phenotype markers (e.g., dull tongue) that were relevant to COVID-19 infections and prognosis. In addition to antiviral/antibiotics and standard supportive therapies, TCM herbal prescriptions incorporating 290 distinct herbs were used in 273 (93%) cases. The cases that received TCM treatment had lower death rates than those that did not receive TCM treatment (17/273= 6.2% vs. 7/20= 35%, P = 0.0004 for all cases;17/77= 22% vs. 7/9= 77.7%, P = 0.002 for severe cases). The TCM herbal prescriptions used for the treatment of COVID-19 infections mainly consisted of Pericarpium Citri Reticulatae, Radix Scutellariae, Rhizoma Pinellia, and their combinations, which reflected the practical TCM principles (e.g., clearing heat and dampening phlegm). Lastly, 59% of the patients received treatment, including antiviral, antibiotics, and Chinese patent medicine, before admission. This situation might have some effects on symptoms, such as fever and dry cough. By using EMR data, we described the clinical features and therapeutic characteristics of 293 COVID-19 cases treated via the integration of TCM herbal prescriptions and Western medicine. Clinical manifestations and treatments before admission and in the hospital were investigated. Our results preliminarily showed the potential effectiveness of TCM herbal prescriptions and their regularities in COVID-19 treatment. | Zixin Shu Yana Zhou Kai Chang Jifen Liu Xiaojun Min Qing Zhang Jing Sun Yajuan Xiong Qunsheng Zou Qiguang Zheng Jinghui Ji Josiah Poon Baoyan Liu Xuezhong Zhou Xiaodong Li | 2020 | Frontiers of Medicine2020，14，6： | 7 |
| 4 | The tectonic fracture modeling of an ultra-low permeability sandstone reservoir based on an outcrop analogy: A case study in the Wangyao Oilfield of Ordos Basin, China显示文摘Due to inherent limits of data acquisition and geophysical data resolution, there are large uncertainties in the characterization of subsurface fractures. However, outcrop analogies can provide qualitative and quantitative information on a large number of fractures, based on which the accuracy of subsurface fracture characterization can be improved. Here we take the tectonic fracture modeling of an ultra-low permeability sandstone reservoir based on an outcrop analogy, a case study of the Chang611 Formation of the Upper Triassic Yanchang Group of the Wangyao Oilfield in the Ordos Basin of China. An outcrop at the edge of the basin is a suitable analog for the reservoir, but the prerequisite is that they must have equivalent previous stress fields, similar final structural characteristics, relative timing and an identical depositional environment and diagenesis. The relationship among fracture density, rock type and bed thickness based on the outcrop is one of the most important fracture distribution models, and can be used to interpret fracture density in individual wells quantitatively. Fracture orientation, dip, geometry and scale, also should be described and measured in the outcrop, and can be used together with structure restoration and single well fracture density interpretation to guide fracture intensity prediction on bed surfaces and to constrain the construction of the 3D fracture geometry model of the subsurface reservoir. The application of the above principles shows the outcrop-based tectonic fracture models of the target ultra-low permeability sandstone reservoir are consistent with fractures inferred from microseismic interpretation and tracer tests. This illustrated that the fracture modeling based on the outcrop analogy is reliable and can reduce the uncertainty in stochastic fracture modeling. | Zhao Xiaoming Liu Li Hu Jialiang Zhou Xiaojun Li Min | 2014 | Petroleum Science2014，11，3： | 6 |
| 5 | Sodium cantharidinate,a novel anti-pancreatic cancer agent that activates functional p53显示文摘Despite the use of many types of chemotherapies for pancreatic cancer, optimal efficacy has not been obtained so far. Pancreatic cancer shows a high incidence of TP53 mutations, inactivating its tumor suppressor activity. In this study, we identified sodium cantharidinate as a novel, potential anti-pancreatic cancer agent that activates p53 function. Sodium cantharidinate reduced the viability of pancreatic cancer cells, including the human primary pancreatic cancer cells, PANC-1, As PC-1, SW1990 and BXPC-3, in a dose-dependent manner. Sodium cantharidinate induced apoptosis and DNA damage of pancreatic cancer cells. Furthermore, proteome-wide sequencing analysis detected a marked perturbation in p53 signaling pathway on PANC-1 cells upon sodium cantharidinate. Consistent with the previous results, sodium cantharidinate treatment decreased Bcl-2 and mitochondrial cytochrome-c protein expression, as well as phosphorylation of MDM2;meanwhile, it increased the levels of cleaved-caspase-3,cleaved-caspase-9, cleaved-PARP, Bax, and phosphorylated p53, thus inducing the apoptosis of pancreatic cancer cells. The p53-activating effect of sodium cantharidinate was strongly abrogated by treatment with TP53-targeting sh RNA. Moreover, sodium cantharidinate inhibited neoplasm growth via the JAK2-STAT3 pathway, which was inhibited by sh RNA-TP53 and triggered by combination with gemcitabine. Combination therapy indicated that sodium cantharidinate and gemcitabine synergistically reduced ex vivo and in vivo growth of pancreatic neoplasm. Further docking studies revealed the different binding fates of sodium cantharidinate to activate wild-type p53 function. Thus, sodium cantharidinate could be a potential agent with promising anti-pancreatic cancer efficacy. | Xiaoxiao Liu Li Zhang Pyone Myat Thu Wenjian Min Peng Yang Ji Li Ping Li Xiaojun Xu | 2021 | Science China(Life Sciences)2021，64，8： | 5 |
| 6 | Lactobacillus reuteri-derived extracellular vesicles maintain intestinal immune homeostasis against lipopolysaccharideinduced inflammatory responses in broilers显示文摘Background:Lactobacillus reuteri strains are widely used as probiotics to prevent and treat inflammatory bowel disease by modulating the host’s immune system.However,the underlying mechanisms by which they communicate with the host have not been clearly understood.Bacterial extracellular vesicles(EVs)have been considered as important mediators of host-pathogen interactions,but their potential role in commensals-host crosstalk has not been widely studied.Here,we investigated the regulatory actions of EVs produced by L.reuteri BBC3,a gut-associated commensal bacterium of Black-Bone chicken,in the development of lipopolysaccharide(LPS)-induced intestinal inflammation in a chicken model using both in vivo and in vitro experiments.Results:L.reuteri BBC3 produced nano-scale membrane vesicles with the size range of 60-250 nm.Biochemical and proteomic analyses showed that L.reuteri BBC3-derived EVs(LrEVs)carried DNA,RNA and several bioactive proteins previously described as mediators of other probiotics’beneficial effects such as glucosyltransferase,serine protease and elongation factor Tu.In vivo broiler experiments showed that administration of LrEVs exerted similar effects as L.reuteri BBC3 in attenuating LPS-induced inflammation by improving growth performance,reducing mortality and decreasing intestinal injury.LrEVs suppressed the LPS-induced expression of pro-inflammatory genes(TNF-α,IL-1β,IL-6,IL-17 and IL-8),and improved the expression of anti-inflammatory genes(IL-10 and TGF-β)in the jejunum.LrEVs could be internalized by chicken macrophages.In vitro pretreatment with LrEVs reduced the gene expression of TNF-α,IL-1βand IL-6 by suppressing the NF-κB activity,and enhanced the gene expression of IL-10 and TGF-βin LPS-activated chicken macrophages.Additionally,LrEVs could inhibit Th1-and Th17-mediated inflammatory responses and enhance the immunoregulatory cells-mediated immunosuppression in splenic lymphocytes of LPS-challenged chickens through the activation of macrophages.Finally,we revealed that the reduced content of both vesicular proteins and nucleic acids attenuated the suppression of LrEVs on LPS-induced inflammatory responses in ex vivo experiments,suggesting that they are essential for the LrEVs-mediated immunoregulation.Conclusions:We revealed that LrEVs participated in maintaining intestinal immune homeostasis against LPSinduced inflammatory responses in a chicken model.Our findings provide mechanistic insight into how commensal and probiotic Lactobacillus species modulate the host’s immune system in pathogens-induced inflammation. | Rujiu Hu Hua Lin Mimi Wang Yuezhen Zhao Haojing Liu Yuna Min Xiaojun Yang Yupeng Gao Mingming Yang | 2021 | Journal of Animal Science and Biotechnology2021，12，3： | 5 |
| 7 | Longitudinal Alterations of Local Spontaneous Brain Activity in Parkinson's Disease显示文摘We used resting-state fMRI to evaluate longitudinal alterations in local spontaneous brain activity in Parkinson's disease(PD) over a 2-year period. Data were acquired from 23 PD patients at baseline and follow-up,and 27 age-and sex-matched normal controls. Regional homogeneity(ReHo) and voxel-based-morphometry(VBM) were used to identify differences in local spontaneous brain activity and grey matter volume. With disease progression, we observed a progressive decrease in ReHo in the sensorimotor cortex, default-mode network, and left cerebellum, but increased ReHo in the supplementary motor area, bilateral temporal gyrus, and hippocampus.Moreover, there was a significant positive correlation between the rates of ReHo change in the left cerebellum and the rates of change in the Unified Parkinson's Disease Rating Scale-III scores. VBM revealed no significant differences in the grey matter volume among the three sets of acquisitions. We conclude that ReHo may be a suitable non-invasive marker of progression in PD. | Qiaoling Zeng Xiaojun Guan Jason C.F.Law Yan Lun Zhujing Shen Tao Guo Min Xuan Quanquan Gu Xiaojun Xu Min Chen Minming Zhang | 2017 | Neuroscience Bulletin2017，33，5： | 4 |
| 8 | Corrosion of carbon steel influenced by anaerobic biofilm in natural seawater显示文摘 | Jizhou Duan Suru Wu Xiaojun Zhang Guiqiao Huang Min Du Baorong Hou | 2008 | Electrochimica Acta2008，，1： | 3 |
| 9 | Suitable Factors of Saussurea involucrata and Standardized Planting Technology显示文摘 | Nurbolat Yanrui CHEN Min LIU Hui WANG Huixia NING Xiaojun WANG | 2012 | Agricultural Science & Technology2012，13，5： | 2 |
| 10 | hTAC internalizes via both clathrin-dependent and clathrin-independent endocytosis in mammalian cells显示文摘 | Xinyu Zhu Min Li Xiaojun Xu Rui Zhang Xiaofei Zhang Zhuo Ma Jingze Lu Tao Xu Junjie Hou Eli Song | 2018 | Protein & Cell2018，9，10： | 2 |
| 11 | A Short Text Modeling Method Combining Semantic and Statisti- cal Information 显示文摘 | Liu Wenyin Quan Xiaojun Min Feng | 2010 | Information Sciences2010，180，20： | 1 |
| 12 | Side-polished SMS based RI sensor employing macro-bending perfluorinated POF显示文摘A refractive index(RI)sensor based on perfluorinated plastic optical fiber(PF-POF)is introduced in this paper.The PF-POF as multi-mode fiber was side-polished(SP)to form a macro-bending single-mode-multimode-single-mode(SMS)structure.Both ends of the sensor were closely connected to single-mode quartz optical fiber(SMF).The spectral char-acteristics of the sensor are measured,analyzed and discussed.The results show that when the length of PF-POF is 8 cm,the macro-bending radius is 3 cm,and the SP-depth is 20μm.The intensity sensitivity reaches−219.504 dBm/RIU in the range of RI=1.330~1.356.A reference is provided for the application of PF-POF in RI sensor in the future.The sensor is featured with low-cost,good flexibility and high efficiency. | Xuezhi Zhang Boyue Yang Junfeng Jiang Kun Liu Xiaojun Fan Zhaozhu Liu Min Peng Guanlong Chen Tiegen Liu | 2021 | Opto-Electronic Advances2021，4，10： | 1 |
| 13 | A short text modeling method combining semantic and statistical information显示文摘 | Liu Wenyin Xiaojun Quan Min Feng Bite Qiu | 2010 | Information Sciences2010，，： | 1 |
| 14 | Processing micrometer-sized particles in crumpled graphene network for freestanding membrane enabled by freeze casting显示文摘Graphene oxide(GO)is widely used in the construction and application of various 2 D membrane-based materials due to its unique colloidal structure.Herein,we demonstrate that micrometer-sized particles can make up freestanding membranes enabled by the extraordinary amphiphilic and polymer-like properties of graphene oxide through freeze casting.The 2 D macromolecule,GO could well wrap the particles for better uniformity and stability in either dispersion or membrane.Importantly,freeze casting plays an important role in avoiding the severe aggregation of micrometer-sized particles in the solventremoving process.After reduction,the membrane exhibits good electrical conductivity while maintaining its integral structure,which can be directly used as a freestanding binder-free electrode.This work provides a universal approach to fabricate freestanding membranes with various micrometersized materials for energy storage. | Jing Cao Xiaoli Zhao Jiahe Wang Huanglin Dou Congcong Liu Xiaojun Yan Yuantao Yan Min Guo Wanyu Zhao Xiaowei Yang | 2020 | Chinese Chemical Letters2020，31，1： | 1 |
| 15 | COX-2 regulates E-cadherin expression through the NF-κB/Snail signalingpathway in gastric cancer显示文摘 | Zhaofeng Chen Min Liu Xiaojun Liu Shanshan Huang Linlin Li Bo Song Hailong Li Qian Ren Zenan Hu Yongning Zhou Liang Qiao | 2013 | International Journal of Molecular Medicine2013，，1： | 1 |
| 16 | A short text modeling method combining semantic and statistical information显示文摘 | Liu Wenyin Quan Xiaojun Feng Min | 2010 | Information Sciences2010，180，： | 1 |
| 17 | Recommendations for the diagnosis and treatment of paroxysmal kinesigemc dyskinesia: an expert consensus in China显示文摘Paroxysmal dyskinesias are a group of neurological diseases characterized by intermittent episodes of involuntary movements with different causes.Paroxysmal kinesigenic dyskinesia(PKD)is the most common type of paroxysmal dyskinesia and can be divided into primary and secondary types based on the etiology.Clinically,PKD is characterized by recurrent and transient attacks of involuntary movements precipitated by a sudden voluntary action.The major cause of primary PKD is genetic abnormalities,and the inheritance pattern of PKD is mainly autosomal-dominant with incomplete penetrance.The proline-rich transmembrane protein 2(PRRT2)was the first identified causative gene of PKD,accounting for the majority of PKD cases worldwide.An increasing number of studies has revealed the clinical and genetic characteristics,as well as the underlying mechanisms of PKD.By seeking the views of domestic experts,we propose an expert consensus regarding the diagnosis and treatment of PKD to help establish standardized clinical evaluation and therapies for PKD.In this consensus,we review the clinical manifestations,etiology,clinical diagnostic criteria and therapeutic recommendations for PKD,and results of genetic analyses in PKD patients performed in domestic hospitals. | Li Cao Xiaojun Huang Ning Wang Zhiying Wu Cheng Zhang Weihong Gu Shuyan Cong Jianhua Ma Ling Wei Yanchun Deng Qi Fang Qi Niu Jin Wang Zhaoxia Wang You Yin Jinyong Tian Shufen Tian Hongyan Bi Hong Jiang Xiaorong Liu Yang Lu Meizhen Sun Jianjun Wu Erhe Xu Tao Chen Tao Chen Xu Chen Wei Li Shujian Li Qinghua Li Xiaonan Song Ying Tang Ping Yang Yun Yang Min Zhang Xiong Zhang Yuhu Zhang Ruxu Zhang Yi Ouyang Jintai Yu Quanzhong Hu Qing Ke Yuanrong Yao Zhe Zhao Xiuhe Zhao Guohua Zhao Furu Liang Nan Cheng Jianhong Han Rong Peng Shengdi Chen Beisha Tang | 2021 | Translational Neurodegeneration2021，10，1： | 1 |
| 18 | COX-2 regulates E-cadherin expression through the NF-κB/Snail signalingpathway in gastric cancer显示文摘 | Zhaofeng Chen Min Liu Xiaojun Liu Shanshan Huang Linlin Li Bo Song Hailong Li Qian Ren Zenan Hu Yongning Zhou Liang Qiao | 2013 | International Journal of Molecular Medicine2013，，1： | 1 |
| 19 | Effectiveness of E-SBIRT intervention in community healthcare institution in China:study proposal for a randomised controlled trial显示文摘Background Many studies have demonstrated the effectiveness of Screening,Brief Intervention and Referral to Treatment(SBIRT)in addressing substance use problem.However,owing to the shortage of counsellors,it has not been widely used in China.With the development of smart medicine,we developed a web-based electronic SBIRT(E-SBIRT)program and explored the effectiveness of E-SBIRT in reducing substance use in China.Methods A randomised controlled trial will be conducted in primary healthcare institutions.Four primary healthcare institutions will be selected and randomly divided into an intervention group and a control group(each institution will recruit 60 participants,and in total,240 participants will be recruited).The control group will get a pamphlet of drug abuse prevention,and the intervention group will get the E-SBIRT intervention and the pamphlet.Both groups will receive baseline and follow-up assessment at 1 and 3 months after the intervention.The primary outcome is the change in scores on the Alcohol,Smoking and Substance Use Involvement Screening Test,and the secondary outcomes include changes in motivation,depression,anxiety,positive/negative emotion,self-esteem,addiction knowledge and addiction severity index.Conclusions If the‘E-SBIRT’program is found to be effective,it will be an accessible,affordable and widely implementable intervention to help participants at moderate risk of substance use to reduce their consumption.The potential benefit is to provide early intervention to high-risk patients in time and reduce the harmful consequences to individuals and society. | Rao Fu Chenxin Yuan Wei Sun Wenzheng Wang Lei Zhang Jing Zhai Qun Guan Xiaojun Wu Jiang Long Min Zhao Jiang Du | 2021 | General Psychiatry2021，34，5： | 1 |
| 20 | Expert consensus on the prevention and treatment of substance use and addictive behaviour-related disorders during the COVID-19 pandemic显示文摘In early 2020,the COVID-19 outbreak complicated the diagnosis,treatm ent and rehabilitation of patients with substance use disorders and increased the risks of substance abuse and addictive behaviours,such as online gaming disorders,in the general public.Substance use disorder is a chronic recurrent brain disease characterised by strong cravings,high recurrence rates,and a high proportion of comorbidity of mental and physical disorders.1 Therefore,regular long-term therapeutic interventions are critical to preventing dm g relapses while maintaining withdrawal. | Jiang Du Ni Fan Min Zhao Wei Hao Tieqiao Liu Lin Lu Jie Shi Haifeng Jiang Na Zhong Xiaochang Lan Shichao Xu Hongxian Chen Xiaojun Xiang Xuyi Wang Hongqiang Sun Bing Li Yu-Ping Ning Jing Li Wanjun Guo Yajuan Niu Lixia Sheng Yi Li Xuebin Liu Xuhui Zhou Mincai Qian Wenhua Zhou Ruiling Zhang Hongxing Hu Yan Xia Zhonghua Su Ruimin Zhang Mei Yang Fen Liu Wei Yuan | 2020 | General Psychiatry2020，33，4： | 1 |
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